Cobetia sp. AM6: CLAM6_07360
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Entry
CLAM6_07360 CDS
T08724
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00540
Lipopolysaccharide biosynthesis
cobe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CLAM6_07360 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cobe01005
]
CLAM6_07360 (lpxC)
Enzymes [BR:
cobe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
CLAM6_07360 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
cobe01005
]
Lipid A
CLAM6_07360 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Cas9_C_2
Motif
Other DBs
NCBI-ProteinID:
BBO55425
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All DBs
Position
885359..886270
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AA seq
303 aa
AA seq
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MIRQKTLQNTIRATGVGLHSGDKVYLTLRPAPVNTGIVFIRTDLEPQAHIRADAMSVRDT
TMCTAVSNGEAKVTTVEHLMSAFAGLGIDNCFVELSAPEVPIMDGSAGPFVFLIQSAGIQ
EQSSLKKFIRIKREIEVRDGDKVATFLPHNGFKVSFAIDFDHPVFEQQKQTTTVDFSTTS
FVKEVSRARTFGFMRDLEFLRSQNLALGGSLDNAIVVDDYRILNDEGLRYDDEFVKHKVL
DAIGDLYQLGHSIIGEFRGYKSGHGLNNMLCRALLENADSYEIVTFENSDAMPISYASPA
LAV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgattcgacaaaaaacactccagaatacgatccgcgccacaggcgttggtctgcactca
ggtgacaaggtttacctgacgctgcgtcccgctccggtcaacaccggcatcgtcttcatc
cgcaccgatctcgagccgcaggctcatatccgtgccgatgcgatgagcgtccgtgacacc
accatgtgcaccgccgtctccaacggtgaagccaaggtgacgaccgtcgagcacctgatg
tccgccttcgcaggcctgggcatcgacaactgcttcgtcgagttgtccgcgccggaagtg
ccgatcatggacggcagcgccggtccgttcgtcttcctgatccagtccgctggtatccag
gagcagtcgtcgctcaagaagttcatccgcatcaagcgcgagatcgaagtgcgtgatggt
gacaaggtcgcgaccttcctgccgcacaacggcttcaaggtgtccttcgccatcgacttc
gatcacccggtgttcgagcagcagaagcagaccaccacggtcgacttctctaccacctcc
ttcgtcaaggaagtgtctcgcgcgcgtaccttcggtttcatgcgtgatctcgagttcctg
cgctcccagaacctcgcgctgggcggaagcctcgacaacgccatcgtcgtcgatgactat
cgcatcctcaacgatgaaggcctgcgttacgacgatgagttcgtcaagcacaaggtgttg
gacgccatcggtgacctctatcagctgggtcacagcatcatcggtgagttccgtggctac
aagtccggtcatggcctcaataacatgctgtgccgcgcgctgctggaaaatgccgatagc
tacgagatcgtcaccttcgagaactccgatgcgatgccgatttcctatgcctctccggcg
cttgccgtctga
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