Cobetia sp. AM6: CLAM6_28500
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Entry
CLAM6_28500 CDS
T08724
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00220
Arginine biosynthesis
cobe00250
Alanine, aspartate and glutamate metabolism
cobe00430
Taurine and hypotaurine metabolism
cobe00910
Nitrogen metabolism
cobe01100
Metabolic pathways
cobe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
CLAM6_28500 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CLAM6_28500 (gdhB)
00220 Arginine biosynthesis
CLAM6_28500 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
CLAM6_28500 (gdhB)
Enzymes [BR:
cobe01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
CLAM6_28500 (gdhB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
HAAS
Motif
Other DBs
NCBI-ProteinID:
BBO57539
UniProt:
A0A5K7YC73
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All DBs
Position
complement(3406325..3411163)
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AA seq
1612 aa
AA seq
DB search
MLHVATDGKQEFLAQLEEQLDKRLPKDKVDVIAAFARDYHATASFEDMAERKLDDLYGST
LAVWHFLQSLEAPKVRAYNPDFEKHGWQSTHTIIEVLHPDMPFLVDSVRIELNRRGITVH
AIHNAVLAVARDDAGQLERVTAPRAENAPQHRESLIYIEVDRHNDAETLEDLETSLREVL
AEVRVAVADFDAMRSQGAQALQELRDNRPPTVSEADHQEACDFMQWMGNDHFTFLGYDEY
TVDEQEDGTRVLNKVEGSELGVLKLDLERYHEQSRHQQSVNSDQYVLIPELLSFAKSAFH
ARVHRPAYPDYITVERFDEEGRVIGERRFLGLYTSTVYNQSPRNVPILRRKVQDVMEAAG
VNPKGHNGKHLLQILEVYPRDDLFQISTDELTRTATSILNIRERRRVRLIVREDRFGKFF
SVLVFVPRDVYSTDLRVRIQNLLCEELNATFGDFTPYLSESVLTRIQFILRFKGDEPGQY
DMRALENKIAQLARSWRDELHAAMVEGFGEEQANELMTRYRDAFPGSYRDDFSPRTAVYD
VGHLRALDEGQAVGLSTYRLVEDDNSGVNLKLFHKHQPIPLSDVLPVLENLGLRVIGERP
YEITRTDSSCWVHDFDLEHHGKGAVELSEVRESFIEAFKKIWSGEAESDAFNRLIIGSGL
DWREVAMLRAYARYLKQIRFGLSQAYIANALGSHPDITRELVQLFNLRFDPQGQGGEDDV
NACRERINGLLDQVSSLNDDRLLRRYVDLMMATLRTNFFQPAEDGQAKDYISFKLDTRSI
PDVPKPRPMFEIFVYSPRVEGVHLRGGKVARGGLRWSDRHEDFRTEVLGLVKAQQVKNAV
IVPVGAKGGFVCKRMPETTDRDVIQKEGIACYQIFIRALLDITDNLSGGDVVAPTAVVRY
DEDDPYMVVAADKGTATFSDIANAISNEYGFWLGDAFASGGANGYDHKGMGITAKGAWVS
VQRHFREMGINIQEDEFSVVGIGDMAGDVFGNGMLLSEKIRLVGAFNHRNIFVDPNPDTA
KSFAERERLFRLPRSSWDDYDKSLISEGGGLFSRDAKTIAISPQMKEVFDISADHLAPNE
LINAMLKAQVDLIWNGGIGTYVKASSESHADVGDKANDGLRIDGRELRCKVVGEGGNLGL
TQRGRMEAAAQQGVRVNTDFIDNAGGVNCSDHEVNIKILLDDIVARGDLTDKQRNQQLAE
MTDEVGELVIKDNYRQTQALSLSEQQSREGMGVFRRFINELEAAGTLDRELEFLPSDEAL
IERSNAGEALTLPELSVLVSYAKSDLKTSLIASDVPDDSYVQQHLERAFPRVLMERFPEE
MYQHRLKREIAATQIANDLVDHMGIAFVRRLEDTTGADKAEIARAYIVARDSFNLEALWT
QIEALDHQVPAELQYRMMGDLMRLMRRATRWFLRQRSSMGVKECISHFAPRLAQLSESIG
ERLKGEARENWEARRDSYVEAGVPEALASTIAATSSLYAGLGIIEAAKATGEKINRVAEA
FYGIGHRLELPWVGDKINGLEVQDSWQAQARESFRDDLDRQQLALTVSVLKQDNAPREID
ERVDSWMASHESLVSRWCSLLGEMKGGAQLSFPLFAVALRELVDLAESKREA
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgctacacgtggcgacggacggcaagcaggaatttcttgcgcagctcgaagagcagctg
gacaagcgacttcccaaggacaaggtggacgtgatcgcggcgtttgcgcgcgactatcac
gcaacggcctccttcgaggacatggccgagcgcaagctggatgacctctacggttccacc
ctggccgtatggcacttcctgcagagcctcgaggctcccaaggtgcgtgcctacaacccg
gacttcgagaagcatggttggcagtcgacgcacaccatcatcgaagtgctgcacccggat
atgccgttcctggtcgattccgtgcgtatcgagctcaaccgtcgtggcatcaccgttcac
gccatccacaacgccgtgctggccgttgcacgtgatgacgccggccagctggaacgcgtg
acggcgccacgtgccgagaacgctccgcagcaccgcgagtcgctgatctacatcgaggtc
gatcgtcacaacgacgccgagacactggaagacctcgagaccagtctgcgtgaagtgctg
gccgaagtacgtgttgccgtcgctgacttcgacgccatgcgcagccagggcgcccaggcg
ctgcaggagctgcgtgacaaccgtccgccgaccgtctccgaggctgaccatcaggaagcc
tgcgacttcatgcagtggatgggcaacgaccacttcaccttcctgggctatgacgagtac
accgtcgacgagcaggaagacggcacccgtgtgctgaacaaggtcgaaggttccgagctg
ggggtgctcaagctggacctcgagcgctatcacgagcagtcccgtcaccagcagagcgtc
aacagcgatcagtacgtgctgatcccggagctgctgtccttcgccaagagcgccttccac
gcccgcgtgcaccgtccggcctacccggactacatcaccgtcgagcgcttcgatgaagaa
ggccgcgtgattggcgagcgccgcttcctggggctctacacctccacggtgtacaaccag
agcccgcgcaacgtgccgattctgcgtcgcaaggtgcaggacgtcatggaagccgccggc
gtcaacccgaagggccacaacggcaagcacctgctgcagattctggaagtctatccgcgc
gatgacctcttccagatctccacggacgagctgacccgtaccgccaccagcatcctcaac
attcgtgagcgtcgtcgcgtgcgtctgatcgtgcgtgaagaccgcttcggcaagttcttc
tcggtactggtgttcgtgccgcgcgacgtctattccaccgacctgcgtgtgcgcatccag
aatctgctgtgtgaagagctgaacgccaccttcggtgacttcacgccgtacctgtccgag
tccgtgctgacgcgtatccagttcatcctgcgcttcaagggcgatgagccgggccagtac
gacatgcgcgcgctggagaacaagatcgctcagctggcccgcagctggcgtgacgagctg
cacgccgccatggtagaaggcttcggtgaagagcaggccaacgagctgatgactcgctac
cgtgatgccttcccgggcagctaccgtgatgacttctcgccgcgcaccgccgtctatgac
gtgggccacctgcgcgcgctggacgaaggccaggccgtcggcctgagcacctatcgtctg
gtcgaagacgacaactccggcgtcaacctgaagctgttccacaagcatcagccgattccg
ctctccgacgtgctgccggtgctggaaaacctcggtctgcgtgtcatcggtgagcgtccc
tacgagatcacccgcaccgattcctcctgctgggtgcacgatttcgacctcgagcatcac
ggcaagggcgcggtcgagctctccgaagtgcgcgagagcttcatcgaagccttcaagaag
atctggtccggtgaagccgaatccgatgccttcaaccgcctgatcatcggctctggcctg
gactggcgtgaagtggcgatgctgcgtgcctacgcgcgctacctgaagcagatccgcttc
ggtctctcccaagcctacatcgccaatgcgctgggcagccatccggacatcacccgcgag
ctggtgcagctgttcaacctgcgcttcgatccgcagggtcagggtggcgaggatgacgtc
aacgcctgccgcgagcgcatcaatggcctgctcgaccaggtctccagcctgaacgacgac
cgtctgctgcgtcgctacgtcgacctgatgatggcgacgctgcgcaccaacttcttccag
ccggcagaagatggccaggccaaggactacatcagcttcaagctcgacacgcgcagcatt
cctgacgtgccgaagccgcgcccgatgttcgagatcttcgtctactcgccgcgcgtcgaa
ggtgttcacctgcgtggcggcaaggtcgcacgtggtggtctgcgctggtctgaccgtcat
gaagatttccgcaccgaggtgctgggtctggtcaaggcacagcaggtcaagaacgcggtc
atcgtgccggtcggcgccaagggcggtttcgtctgcaagcgcatgccggaaaccactgac
cgcgacgtgatccagaaggaaggtatcgcctgctaccagatcttcatccgcgcactgctc
gacatcaccgacaacctgtccggtggtgacgtggtggccccgacggccgtcgtgcgttac
gacgaagacgacccctacatggtcgtcgcggccgacaagggcactgcgaccttctccgac
atcgccaacgccatctccaacgagtacggcttctggctgggcgatgccttcgcctccggt
ggcgccaacggttacgaccacaagggcatgggcatcaccgccaagggcgcctgggtcagc
gtgcagcgtcacttccgcgagatgggcatcaacatccaggaagacgagttcagcgtggtc
ggtatcggtgacatggccggtgacgtcttcggcaacggcatgctgctgtccgagaagatc
cgcctggtcggtgccttcaaccaccgcaacatcttcgtcgatccgaacccggacaccgcg
aagagcttcgccgagcgcgagcgtctgttccgtctgccgcgttccagctgggacgactac
gacaagagcctgatcagcgaaggcggcggtctgttctcgcgtgatgccaagaccatcgcc
atcagcccgcagatgaaggaagtcttcgacatcagtgccgaccatctggcgcccaacgag
ctgatcaacgcgatgctcaaggcgcaggtcgacctgatctggaacggcggtatcggaacc
tacgtcaaggcgtccagcgagtcccatgccgatgtcggtgacaaggccaacgatggcctg
cgtatcgatggccgtgagctgcgctgcaaggtggtgggcgaaggcggcaacctgggtctg
acccagcgtggtcgcatggaagccgcggcccagcagggcgtgcgcgtcaacaccgacttc
atcgacaatgccggtggcgtgaactgctcggatcacgaggtcaacatcaagatcctgctg
gacgacatcgtcgcccgcggtgatctgaccgacaagcagcgcaaccagcagctggccgag
atgacagacgaagtcggcgagctggtgatcaaggacaactatcgccagacccaggcgctg
tcgctctccgagcagcagtccagggaaggcatgggcgtcttccgtcgcttcatcaatgag
ctggaagcggccggcaccctggaccgtgaactcgagttcctgccgtccgatgaagcgctg
atcgagcgttccaacgccggtgaagccctgaccctgccggaactgtccgtgctggtctcc
tacgccaagagcgatctcaagaccagcttgatcgcctctgacgtgccggacgacagctac
gtgcagcagcacctcgagcgcgccttcccgcgcgtgctgatggagcgcttcccggaagag
atgtaccagcaccgtctgaagcgtgaaatcgccgcgacccagatcgccaatgacctggtc
gaccacatgggcatcgccttcgtgcgtcgcctggaagacaccactggtgccgacaaggcg
gaaatcgcgcgtgcctacatcgtggcgcgtgacagcttcaatctggaagcgctgtggacc
cagatcgaggccctcgatcaccaggtgccggcagaactgcagtaccgcatgatgggtgac
ctgatgcgtctgatgcgtcgtgccactcgctggttcctgcgtcagcgcagctccatgggc
gtcaaggaatgcatcagccacttcgccccgcgtctggctcagctctccgagagcatcggt
gagcgtctcaagggcgaagcccgcgagaactgggaagcgcgtcgcgacagctatgtcgag
gcaggcgtgccggaggccctggccagcaccatcgccgcgacctcaagcctctatgcaggg
cttggcatcatcgaggcggccaaggcgaccggcgagaagatcaatcgcgtggcagaagcc
ttctacggtatcggccatcgtctggagctgccgtgggtcggtgacaagatcaacggcctt
gaggtgcaggacagctggcaggcgcaggcacgtgaaagcttccgtgatgatctcgatcgt
cagcagctggcactgaccgtcagcgtgctcaagcaggacaatgcaccgcgcgagatcgat
gagcgtgtcgacagctggatggccagccacgagagtctggtcagccgctggtgctcactg
ctcggcgagatgaagggcggtgctcagctgagcttcccgctgttcgcggtcgccctgcgc
gagctggtcgatctggccgagtccaagcgcgaagcctga
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