Cobetia sp. AM6: CLAM6_29020
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Entry
CLAM6_29020 CDS
T08724
Symbol
mexF
Name
(GenBank) resistance-nodulation-cell division (RND) multidrug efflux transporter MexF
KO
K18299
multidrug efflux pump
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobe02000
]
CLAM6_29020 (mexF)
01504 Antimicrobial resistance genes [BR:
cobe01504
]
CLAM6_29020 (mexF)
Transporters [BR:
cobe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CLAM6_29020 (mexF)
Antimicrobial resistance genes [BR:
cobe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
CLAM6_29020 (mexF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BBO57591
UniProt:
A0A5K7Y754
LinkDB
All DBs
Position
3477036..3480230
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AA seq
1064 aa
AA seq
DB search
MNISSFFIKRPVFAAVLSILTVISGMLSLFQLPISEYPEVVPPTVVVRANYPGANPEVIG
ATVATPLEQEITGVESMLYMDSQATSDGNLTLTVTFALGTDLDKAQVQVQNRVARATPRL
PQEVQQLGITTEKASPNLTMVVHLTSPDGRYDQLWLSNYARLNLKDNLARLEGVGDVQLF
GAGEYSMRVWLDPDAVAARGLSAGDVISALRAQNQQVAAGSVGAQPSPDDNQFQRLLNVR
GRLESAEEFENIVIRVDEDGRLTRLKDVARVELGADSYSLRAQLDGKDAVAMPIFQRPGS
NAIALSDSVRESMSEMSEAFPDGVSYDIVYDPTVFVRGSIEAVIDTLFEAILLVVIVVIL
FLQTWRASIIPLIAVPVSLIGTFAVMQLMGVSINTLSLFGLVLAIGIVVDDAIVVVENVE
RNIELGHSPIEATQIAMREVTGPIIAIALVLTAVFVPTAFISGLSGQFYKQFALTITIST
LISAFNSLTLSPALSALLLKPHGAKPDWLTRVIDGLFGRWLFAPFNRAFSAMANGYTGLI
KKLLRFGVIVGLLYVVLLGATGKLFDSVPGGFIPGQDKQYLVAMAQLPDAASLDRTSEVI
DEMQALALDTPGVAHTVAFPGLSVNGFVNASNSGIVFATLADFDERQSPELSGQAIAAQL
NQKFAGIDEAFVAVFPPPPILGLGTTGGFKLQLQDRGNKGFDELFSAVQTITAKGNADPR
LSSVYSSFRIQVPQYDIDLDREQAMIMGVPVERAFETLQVYMGSLYVNDFNRFGRTYQVR
AQAEQSARLDPDDIRNLKVRSDNGRMIPLGSFVKVTPTTGPDRVMHYNTFVSADINGSPA
PGVSSDQAKAAIEEVLAGNLPQGIGYEWTEVTYQQVLAGNTMIYIFPLVVLLVFLVLAAQ
YESWSLPLAIILIVPMTLLSALAGVWLTGGDNNIFTRIGLIVLVALACKNAILLVEFARE
QQHAGQSRLDAVLTACRLRLRPILMTSVAFTAGVVPLVLATGAGSEMRQAMGVAVFSGMI
GVTVFGLLLTPLFYVGIRRLVEKRESHQDAVTPGSHSESGRRIH
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatctccagcttcttcatcaagcgcccggtcttcgccgcggtgctgtcgatcctg
accgtcatctccgggatgctgtcgctgttccagctgcccatctccgagtatccggaagtc
gtgccgcccacagtggtggtgcgcgccaactacccgggtgccaaccccgaagtcatcggt
gccaccgtcgccacgccgctggagcaggaaatcaccggcgtcgaaagcatgctgtacatg
gactcccaggcgacctccgacggcaacctgaccctgacggtgaccttcgcgctgggcact
gacctggacaaggcccaggtgcaggtgcagaaccgtgtggcccgcgccacgccgcgcctg
ccgcaggaggtgcagcagctcggcatcaccaccgagaaggcctcgcccaacctgacgatg
gtggtccacctgacctccccggatggccgctatgaccagctgtggctgtccaactacgcg
cgcctgaacctgaaggacaatctcgcccgtctcgagggggtcggcgacgtgcagctgttc
ggtgccggcgagtactcgatgcgcgtgtggctcgacccggacgccgtggcggcgcggggc
ctgtctgccggtgacgtgatcagtgcgctgcgtgcgcagaaccagcaggtcgccgccggc
tccgtcggtgcccagccctcgcctgacgacaaccagttccagcgcctgctcaatgtgcgg
ggccgcctggagagcgccgaggaattcgagaacatcgtcatccgtgtcgatgaagatggc
cgcctgacacgcctgaaggatgtggcgcgtgtcgaactgggcgccgacagctattcgctg
cgcgcgcagctggatggcaaggacgccgtggcgatgccgatcttccagcgtcccggctcg
aatgccatcgcgctgtcggattccgtgcgcgagagcatgagcgagatgtccgaggccttc
ccggatggcgtcagctacgacatcgtctacgacccgacggtcttcgtgcgtggctccatc
gaggcggtcatcgacaccctgttcgaggccatcctgctggtcgtgatcgtggtgatcctg
ttcctgcagacctggcgggcctcgatcattccgctgatcgcggtgccggtctcgctgatc
gggacgtttgcggtcatgcagctgatgggcgtgtcgatcaatacgctgtcgctgttcgga
ctggtgctcgccatcggtatcgtcgtcgatgacgccatcgtggtggtggagaatgtcgag
cgcaacatcgagctgggtcactcgcccatcgaggccacccagatcgccatgcgtgaggtg
accggcccgatcatcgccatcgcgctggtgctgacggcggtgttcgttccgacggccttc
atcagcggcctgagcggtcagttctacaagcagttcgcgctgaccatcaccatctcgacg
ctgatctcggccttcaactcgctgacgctgtcaccggcgctgtcggctctgctgctcaag
ccccacggtgccaagcctgactggctgacccgcgtcatcgatggcctgttcggtcgctgg
ctgttcgcgccgttcaaccgcgccttcagtgcgatggccaacggctataccggcctgatc
aagaagctgctgcgcttcggtgtcatcgtcggcctgctgtatgtcgtactgctcggcgcc
accggcaagctgttcgacagcgtgcccggcggcttcatcccggggcaggacaagcagtac
ctggtcgcgatggcccagctgccggacgccgccagcctcgaccgcacctccgaggtcatc
gacgagatgcaggcactggcgctggacacaccgggcgtggcgcacaccgtggccttcccg
gggctctccgtgaacggcttcgtcaatgcctccaactccggcatcgtgttcgcgaccctg
gcggacttcgatgagcgacagtcgccagagctttccggtcaggcgatcgccgctcagctg
aaccagaaattcgcggggatcgacgaggccttcgtcgccgtcttcccgccgccgccgatt
ctgggcctgggcactacgggtggcttcaagttgcagctgcaggaccgtggcaacaagggc
ttcgatgagctgttctccgccgtgcagaccatcaccgccaagggcaacgctgacccgcgt
ctgagcagtgtctactccagcttccgcatccaggtgccgcagtacgacatcgatctggat
cgcgagcaggcgatgataatgggcgtgccggtggaacgtgccttcgagactctgcaggtg
tacatgggctcgctgtacgtcaatgacttcaaccgcttcgggcgtacctatcaggtgcgc
gcccaggccgagcagtcggcgcgtctcgacccggatgacatccgcaacctcaaggtgcgc
agcgacaacggccgcatgattccgctgggcagcttcgtcaaggtgacaccgaccaccggc
ccggaccgcgtgatgcactacaacaccttcgtcagcgccgatatcaacggctcgccggcg
ccgggcgtctccagtgatcaggccaaggccgccatcgaggaagtgctggccggcaacctg
ccacagggcatcggctacgagtggacggaggtgacctaccagcaggtactggccggcaac
accatgatctacatcttcccgctggtggtattgctggtattcctggtgctggccgcccag
tacgagagctggtcgctgccgctggcgatcatcctgatcgtgccgatgacactgctgtcg
gcgctggccggtgtctggctgacggggggcgacaacaacatcttcacgcgcatcggcttg
atcgtgctggtagcgctggcgtgcaagaacgcgatcctgctggtcgagttcgctcgtgag
cagcagcatgctggccagagtcgtctggacgccgtgctgacggcctgtcgcctgcgtctg
cgtcccatcctgatgacgtcggtggccttcaccgcgggcgtggtgcctctggtactggcc
actggtgccggcagcgagatgcgccaggcgatgggcgtggcggtgttctccggcatgatc
ggcgtcaccgtattcggtctgctgctgacaccgctgttctatgtcggtatccgccgcctg
gtcgagaaacgtgaatcgcatcaggacgctgtcacgccgggcagccattccgagtcaggc
cgccgcattcattga
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