Cardiocondyla obscurior: 139105371
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Entry
139105371 CDS
T10704
Symbol
Tdg
Name
(RefSeq) uncharacterized protein Tdg
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139105371 (Tdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobs03400
]
139105371 (Tdg)
Enzymes [BR:
cobs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
139105371 (Tdg)
DNA repair and recombination proteins [BR:
cobs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
139105371 (Tdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
139105371
NCBI-ProteinID:
XP_070517528
LinkDB
All DBs
Position
LG09:complement(6032749..6139972)
Genome browser
AA seq
1095 aa
AA seq
DB search
MQVATLFRESATLLGASSLDPPQTHHHQGMLQPQPQQQQQPPHQQMQQQQQHATDMHLVG
HHMQHHYKMYSSPVQNGPNGTTTMSCASSQGVMVKQEARDDGYETSPDLEMRSTGGDSSQ
QYHTPLTPHTPHTPHTPHTPLTPISATAHQPQQPGSTASALGQVAIKCETPVDPYSFVDE
EMSMGGMRTASSPGGGGGGGNPENMTCPGGAQPGLGTPTSTPPGALPGPQHHQMNLVMNG
AASVNPQLAHQPKKRGRKKKSEMILTPEEAELAEAKKRAKTYKERKKHDRFDGMPEEEVS
KRVLPDHLTNNLDIIIIGINPGLFAAYKGHHYAGPGNHFWKCLHLSGLTPEPLTADDDYK
LLRFGIGFTNMVARATKGSADLTRKEIKEGSHILLEKLRKYKPKIAVFNGKLIYEVFSGK
KEFGFGRQPNLVEGTNTYMWVMPSSSARCAQLPRAADKVPYYAALKKFRDYLNGTITHLD
ESDIVFADSKLKKKEHEAIEDKKPVFVDDLPDGESRITEINGMGIKQEGVIPGKKKRGRP
KKIKNPEDQPPPDPEKLDANGEVIKKRRGRPKKIHQQQKQMESREREQQQQQQHQAMSHL
NDGYGNVPNCFSPPLMSPPKTFPHMAPYAQPPMNDGFFGQGMNDNSPYNMSAKQSPVHLQ
HYSQSPKSMSLSFTHSDLSSEINTAISSENNLEPSPLTSPSVEHPDFEPPTSMSQQNMGN
DHRQYNPAGGPDPTGHHSSPGTPSHNSYAYMGYHDQPPDAHNPHPHQTTPTPLSQTAEDH
SHHSHPTPPHHPHTPTHTSMSPHHPHEQYGIKRNSGQDVASKSLSDLESLVDQIPSIADG
GNQRLQHSHPGMPGDDSLAEKMDAHHQSYMSGFGGMPGGPTGMTNYSPPLPLGGGPYPSS
LHHSPTDAGYGGLYGMNNRHHQESQQQQQQQQQQQQHQQQQQQQHSKSSYTVENLASSNF
TPSMNHGHPGNSYPNIIPGHYPVPMGSTNGYLFGGLESSLMQRTYGIGGMSGMSSMHPSA
ALGHPIAANPYPYNGSYSSSFDAYPTPPAGIHAPSANYPGYVSTAGAAPSTTTTPPSYLA
PSHHRPPVDLSYDGV
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggccacgttgttcagggagagcgctaccctgctgggtgcgtccagcctggac
cccccgcagactcaccatcatcagggtatgctccagccgcagccgcagcaacagcagcag
ccgccgcatcagcagatgcagcagcagcagcaacacgccaccgacatgcacctagtcggc
caccacatgcagcaccactacaagatgtattcgtcaccggtgcagaacggaccaaacggc
acgacgacaatgagctgcgcgagttctcaaggggtaatggtgaagcaggaggcgagggac
gacggttacgagacgagtccggacctcgagatgaggagcaccggcggtgacagcagtcag
cagtatcacacgccgctgacaccacacacgccgcacacaccgcacacgccgcacacaccc
ctcacgccgatatcggcgacagcgcatcaaccccagcagccaggctcgaccgcctccgcc
ctcgggcaggtcgcgataaaatgcgagacgccggtggacccgtactcgttcgtcgacgag
gagatgtcgatgggcggcatgagaacggcgagcagtccaggcggcggcggcggcggcggc
aatcccgagaacatgacgtgtccgggcggcgcccaacctgggctgggtacacccacgtcg
acgccgcccggggcgctgcccgggccacaacatcatcagatgaatctcgtgatgaacggc
gccgccagcgtcaacccgcagctggcgcaccagccgaagaagcggggccgtaaaaaaaag
tcggagatgattctcacccccgaagaagcggagctcgcggaggccaagaagcgcgcaaag
acgtacaaagagaggaagaagcacgacaggttcgacggcatgccggaagaggaagtgagc
aagcgcgttctaccggaccacctcaccaacaaccttgacattattataattggtatcaac
cccggactgttcgcggcttataagggacaccactacgctggacctgggaatcacttctgg
aaatgcctacatctaagtggtctgacgcccgaaccgttgactgcggacgacgattacaag
cttttacgattcggcatcggcttcacaaatatggtagctcgtgcgacgaagggcagcgca
gatcttacaagaaaggaaattaaagaaggtagtcacattctactcgagaagctgcgaaag
tataagccaaaaattgcagtattcaacggcaaactcatatacgaagtattctcaggcaag
aaggagtttggatttggaagacagcccaatctcgtcgagggcaccaacacgtacatgtgg
gttatgccctcaagcagcgcgaggtgtgcgcaactaccacgtgctgccgacaaggtgcca
tattacgctgcgctgaagaagttccgcgactacctgaacggtacgattacgcacttggac
gagtcagacatcgtattcgccgactcaaagctcaaaaagaaggagcacgaggcgattgag
gacaagaagccagtgttcgtcgacgatttgcccgacggtgagagccgaatcacggagatc
aacggcatggggattaagcaagagggtgtgatacctggaaaaaagaaacgtggcaggccg
aagaagataaaaaatccggaggatcaaccgccgccggatcctgaaaaattagacgcgaat
ggagaggttatcaaaaagcgtcgcgggcgtccgaaaaagatacaccaacaacaaaagcag
atggaaagtcgtgagagagaacagcaacagcagcaacagcatcaggcgatgagccacttg
aacgacggttacggtaacgtgccgaattgcttttcgcccccactgatgtcaccgccgaag
acgttcccgcacatggcgccgtatgcgcagccgccgatgaacgatggattcttcggccag
ggcatgaacgacaatagcccgtacaatatgagcgcgaagcagagtccggtgcacctgcag
cactacagccagagccctaagtccatgtcgctgtcgttcacgcattcggacctgtcgtca
gagatcaatactgcgatctcgtcggagaacaacctcgagccatcgcctttgacgtcgccc
agcgtcgagcacccggatttcgagccgcctactagcatgtcgcagcaaaatatgggcaac
gaccatcgtcagtacaatccggccggaggacccgatccgacgggccaccatagcagtccc
ggcacgccgtcccacaacagctacgcctatatgggttatcacgaccagccgccggacgct
cataatccgcatccacaccagacgacgccgacgcctctcagccaaaccgctgaagaccat
tctcatcattcgcatcctacgccaccgcatcatccgcacacgcccacgcacacgtccatg
tcgccgcaccatccgcacgagcagtacggcatcaagaggaactctggccaggacgtggcg
tcgaaaagtctgagcgatttggaatctctcgtagatcagattccgagcatagccgacggc
ggcaatcagcgtctgcagcattcgcatccgggtatgccgggcgacgactccttagcggag
aaaatggacgcccatcatcagtcttacatgtccggttttggcggtatgccgggaggacca
accgggatgactaattatagtccaccgttgccgttaggcggtggaccttatccctcctcg
ctacaccactctcccactgacgcgggctacggaggtttgtacggaatgaacaatcgtcat
catcaagagtctcagcaacaacagcagcagcagcaacaacagcagcagcatcaacagcag
caacagcagcagcacagcaagtcgtcctacacagtggaaaatctcgcgtctagcaacttc
actccgagcatgaatcacggtcatcctggtaattcttatcctaacatcatacccggccat
tacccagtaccaatgggctcgaccaacggttacctgttcggcggcctcgaatctagtttg
atgcagcgtacctacgggatcggcgggatgagtggcatgagtagcatgcacccgtccgcc
gctctcggccacccgatagcggccaacccgtatccgtacaacggctcgtactcgagctcg
ttcgacgcttacccaacaccaccagcgggcatccacgcgcccagcgccaattaccccggc
tacgtcagcacggctggcgcggcgcccagcaccaccaccacgccgccgtcctacctcgca
ccgtcgcaccacagaccaccggtcgacctctcctacgacggtgtatga
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