Cardiocondyla obscurior: 139106090
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Entry
139106090 CDS
T10704
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139106090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cobs04121
]
139106090
Enzymes [BR:
cobs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139106090
Ubiquitin system [BR:
cobs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139106090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
zf-C3HC4_2
MHC_I_3
HlyD_2
DUF7310
FUSC
Motif
Other DBs
NCBI-GeneID:
139106090
NCBI-ProteinID:
XP_070518703
LinkDB
All DBs
Position
LG10:complement(3696155..3702705)
Genome browser
AA seq
1097 aa
AA seq
DB search
MANRDPPVPSKLADDHSVETLAEVFRCFICMEKLRDAHLCPHCSKLCCYTCIRRWLTEQR
SQCPHCRASLHLHELVNCRWVEEVTQQLDTLQAVCISNFRHDDSTRDRCTAHQEKLSVYC
WTCRKCICHQCALWGGTHSGHTFKPLQDVYEQHVSQIKAEVGQLNRRLMELISLVQEVER
NVESVRAAKDERVREIRNAIELMIARLDSQLKAKLLTLMGQKNSLTLETEQLEALLQEVE
YQLHTCTRSELIVKSAELSRKIHQIRKKPMTSFVTAPVPADFHSEIVPGYDSATFAMQNF
TQLQLKADPVYSSPLYVNGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVE
MIHQGSRDTSKNIVREFASDFEIGECWGYNRFFRLDLLATEGYLNTELDTLILRFQVRPP
TFYQRCRDQQWYISQLLTFQNQYITQINELKERLAIEISRNAMAATKATSGTAMCGAAAN
SSPLSMQQQQNVGDLTTSSSITRTIDKYFTANGTPVRSIPSTLPNNANSTISSDQLMSMC
DLDELSMHTSTLSSKMPLKIHRTNSNLNVIETERSLSPHCVNDTSLTERQAAGIHLISST
SPYSSLNVLSQQPLNLLSSNSASDPLLSATSMVSNTHRVNDSSVAESEAAQRGTNNASPG
ECVQTANAGVRSSSSCYLSRALNLSSSSSSSSDSGELSEHDIYMDECEHNEPNVTLLDLT
NDENDVDDETMSGENDVEVAESLSSWVPNKQRSKQQNNRNSITDTRRLREIMLLHLFEMQ
DKNSTWNSLCLEQSRSDGSCNSRSPLTNRRRRSSSPLHCNAPIQSTATAVYSHKHPELDT
AACNDLNLSTDYNHRNCVFHHSQSLLALCGTKTKLNWLRNICQSKLSAMASNSQITKSEP
ATRSNSIDCENDIPKLPAANKISHDLESSRLRLDLIVPNVLLDSNKIMSKHLLSRRQSSP
SSSTSMNLINDNSKMFEFDQLFENIQLSPDSQKDVTCGTKSRKNTLSDAKNNACTASGNS
VALSLTQESTSSSTNTAVTENTIPSPNSYSWAPASYHGQKAVLDIAIQGSSNNSLNKTID
NYFVLCRSAEETTHSLP
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgggatccgccggttccctcgaaactcgcggacgatcatagcgtcgagaca
ctagcagaagtcttccgatgttttatttgtatggaaaaactgagagatgcacacctctgt
cctcactgcagcaaattatgttgttatacctgtattagaagatggcttaccgagcagcgt
tctcagtgtcctcattgccgagcgtctctccacttgcatgagctagtaaattgtcgttgg
gtggaagaagtgacccagcagcttgatacattacaggctgtttgtatttctaactttcga
catgatgattctaccagagacagatgcacagcacatcaagaaaaattatcagtgtactgc
tggacctgtcgcaaatgcatttgtcatcagtgtgctctatggggaggcacccactcagga
cacaccttcaaacctttacaagatgtttatgagcaacatgtttctcaaataaaagctgaa
gtaggtcagttaaatagacgcctcatggagttgatcagtcttgttcaagaagtggaaaga
aacgttgaatcagtaagagctgcaaaagatgaaagagttagagagattagaaacgcgata
gaattaatgatagctcgtttggattcccagttgaaagctaaactgctgaccctgatgggt
caaaaaaactcgttaactttggaaaccgagcagttggaggctttattacaagaagtggaa
tatcagttgcatacatgcacgcgctctgaattgattgtcaaaagtgctgagctttctcgt
aaaatccatcaaattcgtaaaaaaccaatgacgagttttgtaactgcacctgttccggca
gattttcatagtgaaattgtgccgggttatgacagtgcaacatttgccatgcagaacttt
actcagcttcaattaaaagctgatccagtatattcttcgccgttgtatgtgaatggattg
tgttggcgattgaaagtatatccagatggcaatggagttgtacgcggaaattatttgtca
gtattcttggaactcagtgctggattaccagaaacttcaaagtatgaatacagagttgaa
atgattcatcagggttcacgtgatacaagtaaaaatatcgtccgtgaatttgcctccgat
tttgagatcggcgaatgttggggatataatagattctttcgattagatctactcgcgaca
gaagggtacttaaatacagaattggatacccttatcttgagattccaagtgcgaccacca
acattttatcaacgctgtagagaccagcagtggtatattagtcaactattgacatttcaa
aatcagtatattactcaaattaatgaattaaaggagagactagcgatagaaatttctcgt
aatgctatggcagctacaaaagctactagtggaactgcaatgtgtggagcagctgcaaat
tcgtcacctttatctatgcagcaacaacagaatgtaggcgatttaacgaccagttcaagt
attacacgaacaattgacaagtatttcactgcaaatggcacaccagtaagatcaataccc
agtacacttcctaacaatgccaactcgacaatatcaagcgatcaactgatgtcaatgtgc
gacttggatgaactttcgatgcatacatcgacgttatcctcgaaaatgccgttgaagata
caccgtactaatagcaatctgaacgttatcgagactgagcgttctttatcgccacactgt
gttaatgacacatcactcacagaacgccaagctgccgggattcacctgatttcttcgaca
tcgccttattcgtcgcttaatgtacttagtcagcagccgttgaatttattgtccagcaat
agtgcaagcgatcctttgctgtctgcaacatcgatggtgagtaatacacatcgagtcaac
gattcaagcgttgcagaaagtgaagctgcacaacgtggtaccaataatgcctcgcccgga
gagtgcgttcaaactgccaacgctggtgtgcgttcttcgtcgtcatgctacttgtctcgg
gcgttgaatctctcgtccagtagcagtagcagtagcgatagtggcgaattaagtgaacac
gatatttatatggatgaatgtgagcacaatgagcccaatgtcacgcttctagatttgacg
aatgacgaaaatgatgtagatgatgagacaatgtcaggagaaaatgacgttgaagttgcc
gagtctctttcatcctgggttccaaataagcaacgttcaaagcagcaaaacaataggaat
agtattacagatacgcgcagattgagagaaataatgttgctgcatttgtttgagatgcag
gataaaaattcaacgtggaactctttgtgtcttgaacaatcgaggtcagacggaagctgc
aattctagaagtccactcacgaatcgacgacgtcgcagctccagtccgttgcactgcaat
gctccgatacaatccaccgcgacggcggtatactctcacaagcaccccgagcttgacact
gccgcctgtaatgatttaaatttaagcactgattacaaccatcgcaattgcgtttttcac
cattctcagtcgttattggctctttgcggtaccaagacaaaattgaattggttacggaat
atttgccagtcgaagttatccgcgatggcttctaacagtcaaatcaccaaatccgaacct
gcaacgcggtccaattcgatagactgcgaaaacgatatcccaaagttgccggcagctaat
aaaatcagccacgatttggaatcgtcaagattgcgtctggatttaatagtgccaaatgta
cttctagacagtaacaaaattatgtcgaagcatttattgtctcggcgccagtcgtctccg
agttcgtccactagcatgaatttaataaatgacaatagcaagatgttcgagtttgaccaa
ttatttgagaatattcaattgtcgccggattctcagaaagatgtgacctgcggtacaaaa
tcaagaaaaaatactttatccgacgcaaaaaataacgcttgcactgccagtggaaattcc
gttgcgctctcgttgacgcaagagagcacatcgtcgtctacaaacactgctgtaacagaa
aatactattcctagtcccaacagttatagctgggcacccgcatcgtatcacggacaaaaa
gctgttttagacatagcgatacaaggttcttcgaataattctctcaataagactatcgat
aattattttgttttgtgcaggtcagcagaagaaaccacacacagtttgccgtaa
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