Cardiocondyla obscurior: 139106128
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Entry
139106128 CDS
T10704
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139106128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139106128
03032 DNA replication proteins [BR:
cobs03032
]
139106128
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
139106128
mRNA cycle factors
Common to processing body (P body) and stress granule
139106128
DNA replication proteins [BR:
cobs03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
139106128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
TPR_11
Motif
Other DBs
NCBI-GeneID:
139106128
NCBI-ProteinID:
XP_070518775
LinkDB
All DBs
Position
LG10:3460058..3500913
Genome browser
AA seq
1721 aa
AA seq
DB search
MANRDKGRRKWGAYSQESMTSKLEKDRLAGIRGGGNRASQALYRPGSGPLRKSGRCINAT
DEYDDENGSQEKSRMTSVQYRSRHSQLNKINPMQDSPPLSQIDNVTEKLDNTHINYRNSS
NSELTQSSGNNSGGGISRNDLKKKSRKPEQLLYVPKKVKEALAEQDGINRSPSHATWERE
REESNDRDERDLHSNRNHKSDRSRASSHSTRDNESDGRSRDDTNKRYSGNRRHRHVNENE
ERWHWRSDSPVSGRTCTNRKDNSREVRQGSEPLSMTNQSDSNRTRDTRSVEPVGHSDKFQ
GKPPSGRRGNAKDSLSKNSKLELLPPRFQKKYLIDNGYALPNNPGTSTEDSWNGSSITFQ
QGMSSYNYPSIQHSQTMQNLPPFGSLPPQSNWSNTIPTRSRGRGRLRPEEFYGTASSIFR
PVTPESAPSSRSHTPSQEYMNRSYDRRGSNSTMYTSMESLSRADSLMMPPPSSASPATSQ
SNSNRGHRSPENHRKGATSPIDIRTTNQQRTITSNTYEHNSSLDKQNNQQNTNLSSVKSE
SCNKSSFATSDTFDWSEEVELNEKLEQEHLSRSSSVLSIRESTSVLRSQAVGESYKRRRK
KKTDKHRDVDRGNSRDKGRGNSRERQKNQQNRENDNYNNNQKNNNSSRRYDHRRRNIIQH
SRESSKDRNYSVSYRNYEELHRRRTDRYLDEDWRTGRKISTCESDDGRQTPKVSSHNAPL
SSVNSNTTVRRSSPTGYSNAQPGVLILPNETNQSSPNQTATTSQQRTGVQQQRTLFDPNN
PYKPIVITSPGSRAAVQRDNDMQVSNVPVFQSNVGITSPHYSFHGAQMDGMPPPYMNDQI
GNVRPSWYEPFSASFHSAKNHCLLLDIERADLELQWIISSGGFASRLDRVSYIRHFLQQS
LKILLETDIKFCQAENVEQHFWKILFYNLIEMLRKAMPKENSEGRERYKQIMLNIIDDGT
TYLESLLTTLETTYQFKLDTFLASSNLPKGLGLLGLALVSAQKIFLFLGDLARYREQANE
TSNYGKSRQWYLKAQQINPKNGRPYNQLALLAHYARRKLDAVYYYMRSLMASNPFHSARE
SLIGLFDENRKKYESIERKRKEERESKERARMKEKEGANIIGGGLRRETWIHPSDGRRVR
RTTSATNEAILSHASDLEELSQLTSVEVNKRFVTSYLHVHGKLITKIGMETFQEAGVQML
KEFRALLQHSPLPLPGTRLLQLLALNMFAIETTQLKDSQMEQGYRSEVQERALVVSLQMF
SLILERGVSLLKAQLDSGQEPRLVVGEDLQVLLPAIKIWCDWMLCHSTVWNPPPSCTDYR
VGPPGDAWSRLATMVNLLEKLNYTRMTLIQGKDTEDREEDLELVKLPEDITLAGFTPLML
NPQDPCYVEKTEDMEVAQMCLRISKILFFGQVFLCGLETPVLKLQKSETGVSEYVSVVEA
SSTSSPSSPPTQSDSELLVESYSEGEEEESISTSRRLPSCGNVSDDTTATVAAVEIRSLI
ERKEELERRQRKQDRHRQRVQEILQKSSVSVDIEVRPRQLVPDTNCFIDYLQQLQTIVRA
ISGAQPIYTLMVPLVVLNELEGLARGADARDCPPASRATLNPEHVARVAENAKAALAFAR
SRNPAIRCLTTRGTVLSSSTFTVEEDVDKDGLTRNDDRILTTCLSLCRSIKDQANADEGQ
PRRLRREVVLLTDDRNLRVKALARDVPVREVPDFMQWAGLG
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcgacaaaggacgcagaaagtggggagcatattcacaagaatcaatgacc
tcaaaattagaaaaagatagattagcaggaatacgaggtggagggaatagagcatctcag
gcgttatacagaccaggaagtggccctttacgtaaatcaggcagatgtattaatgctact
gatgagtatgatgatgaaaatggttcacaagagaaatctaggatgacttccgtccagtat
cgttcaagacattcgcaacttaataaaattaatccaatgcaagatagtccacctctgtca
caaattgataatgtaactgaaaaattggacaatactcatattaactatagaaatagcagc
aatagtgaactgacacaaagttctggtaataattctggtggaggaataagtagaaatgat
ttaaaaaagaaaagtaggaaacctgagcaattgttatatgtacctaaaaaagtgaaagag
gcattggctgaacaggatggaattaacagatctcccagccatgctacatgggaaagagaa
agagaagaaagcaatgatcgcgatgaacgtgatttacattctaaccgtaatcataaaagt
gatcgcagtcgagcaagcagtcatagtacacgagacaatgaaagtgatggcagaagtaga
gacgatactaataaacgatactcgggtaatcgtcgacatcgtcatgtcaacgaaaatgag
gaacgttggcattggcgatctgattcaccagtatctggtagaacatgtacaaatcgaaag
gataactcgcgtgaagtcagacagggctcagaacctttatctatgaccaatcaaagcgat
tctaatcgtacgcgagacactcgtagtgttgaacctgttgggcattctgataaatttcaa
ggcaaaccgccttcaggcagacgtggcaatgcaaaagatagtttatcaaaaaatagcaaa
ttagaactcttgccaccacgtttccaaaaaaaatatcttattgataatggatatgcatta
cctaacaatccaggaacatctacagaggattcctggaatggtagcagcattacctttcag
cagggtatgtccagttataattatccatcaatacaacattcgcaaacaatgcaaaatcta
ccaccatttggatcattgccacctcaatctaattggtctaatactataccaacaagaagt
aggggtagaggtagacttcggcccgaagaattttatggtacagcgagcagcatattcagg
cctgtaactcctgagtcggctccaagttctagatctcatactcctagccaggaatatatg
aatcggtcttacgatcgtcgtggtagcaatagtactatgtacactagtatggaaagttta
agtcgtgccgatagtttaatgatgcctccaccgtcgtcagcatcgcccgcaacctctcaa
tcaaattcaaacagaggccatagatcacctgaaaatcaccgcaaaggcgcaacatcgcca
atagatattcgcaccaccaaccagcaaagaacaattactagtaacacctacgaacataat
tcaagtctggacaagcagaataatcaacaaaacacaaatctcagttctgttaaaagcgag
tcatgtaacaaatcatcttttgccacatccgacacttttgactggagcgaagaagttgaa
ttgaatgaaaagttagagcaggaacatttgagccgtagttcgtccgtattgagcatacgg
gaaagtacaagtgtattgcgaagtcaggccgtaggtgagagttataagcgacgtagaaag
aaaaaaactgacaaacatcgtgatgtcgatcgtggcaatagcagagataaaggacggggt
aacagtcgtgaacgtcaaaaaaatcaacagaatagagagaacgataattataataataat
caaaaaaataataatagtagtaggcgatacgatcatagaaggcgtaatatcattcagcat
agccgagaatcaagtaaagacagaaattatagtgttagctacagaaattatgaggaactt
cacagacgcagaactgatagatatttagatgaagattggagaactggtagaaagatatca
acttgtgaatcggacgatgggagacaaactcctaaagtttcctctcacaatgctccactt
tcgagcgtgaattcaaacacaacagtacgtcgatcttctccaacgggatatagtaacgct
caaccgggcgtcttgattttgcctaatgagactaatcagtcgtctcccaaccaaacagct
acaacttctcagcaaagaaccggagtgcaacaacagagaacactctttgatccaaataat
ccatataaacctatagttattacttcaccagggagtagagcagctgtgcagagggataat
gacatgcaagtctcaaacgttccagtatttcaatctaacgtaggtattacatcgccgcat
tattctttccatggagctcaaatggatggcatgccaccaccatacatgaacgaccaaatc
ggaaatgtaagaccttcatggtacgaaccattttcagctagttttcattcagcaaagaat
cactgccttttattggacatagaacgagccgatttggaactacaatggataataagttct
ggtggttttgcctcgcgtttggatcgagtctcgtatatacgacatttccttcaacagagc
ttaaagattttgcttgagactgatataaaattctgccaggcggaaaacgttgagcaacat
ttttggaagatattgttttataatctgattgagatgttacgaaaagcgatgcccaaagaa
aactcggaaggacgagaacgttataagcagattatgttaaatattattgacgatggtacc
acttatttggaaagtttattaactactcttgagaccacgtatcagtttaaattagacacg
tttcttgcatcgtcaaatctacctaagggcctcggactcttaggactggccttagttagt
gctcaaaagatatttttatttttgggtgacttggcgaggtacagggagcaagcaaatgaa
acgagcaattacggaaaatccagacagtggtacttaaaagcacagcaaataaatcctaaa
aatggtagaccttataatcaacttgccttattggcgcattatgcgagacgaaaattagac
gctgtgtattattatatgagatctcttatggcgtccaatcctttccattctgccagagaa
agcttgataggactcttcgatgaaaatagaaaaaagtacgagtctatcgaacgtaaacgg
aaggaagaaagagaatcgaaggagcgtgcgaggatgaaggaaaaggaaggtgcgaacatc
attggcggtggactaagaagagaaacgtggattcatcccagtgacggtagacgggtgcga
cgtacaacgagtgcaaccaacgaagcaatattgtcccacgcaagcgacttggaggagtta
tcgcaattaacgagtgtcgaggtgaataaacgattcgtcacttcgtaccttcacgtgcac
ggtaaactcatcactaaaataggaatggagacttttcaagaagctggtgttcaaatgctg
aaagaattcagagccctgttgcagcactcgccactaccacttcctggtactcgtttgctt
cagcttttggcgctcaacatgttcgcgatcgagaccacgcagctgaaagattctcagatg
gagcaaggttacagatcggaagtccaagagcgtgcactcgtcgtatcgctgcagatgttc
agcttgatcttggagcgcggtgtatccttgctgaaagctcagctagatagcgggcaggag
ccgaggctagtggttggcgaggatctccaagtgcttctaccggctattaagatctggtgc
gactggatgctctgccacagcaccgtttggaatcccccgccgtcttgcacggattacaga
gtcgggccaccgggagacgcgtggagtagattagcgacgatggtaaatctcctagagaaa
ttaaattacaccagaatgactctgattcaaggcaaggatacggaagaccgcgaggaagac
ctggagctcgtgaaactaccggaagatatcaccctggccggattcactccccttatgttg
aatcctcaggacccttgctacgtggagaaaacagaagatatggaagtggctcagatgtgc
ctcaggataagcaagatcctcttcttcggtcaagtgttcttgtgcggcttggagacccca
gtgctgaaattgcagaaaagcgagaccggtgttagcgaatatgtttccgtggtcgaggct
tcgagcacgagttcaccgagttcaccgccgacacagagcgactcggagcttctagtggaa
agttatagcgagggggaggaagaagagtcgatttccacgtcgagaagattaccctcttgc
ggcaacgtgtcggacgatacgacggctaccgtggcggctgtcgagataaggtcattgatc
gagaggaaggaagaactggagaggcggcaacggaaacaagatcggcatcgacagcgggta
caggaaattctgcaaaagtcttcggtgtcggtggacattgaagtgagaccgagacagctg
gtgcccgacactaactgcttcatcgactatctgcaacagctacaaactatcgtaagagcc
atttccggagcgcagccaatctacacactcatggtgccactcgttgtgttaaacgaacta
gagggtctagcccgaggcgccgatgcgagggattgtcctccagcgtcaagagcaactttg
aatcccgagcatgtggcacgagtagccgagaatgccaaggcggcactagccttcgcgaga
agtcgaaatccggcgatccgatgtctgaccacgaggggcaccgttctttcatccagcact
ttcacggtcgaggaagacgtcgacaaggacggactgacacgcaacgacgacaggatatta
actacgtgcctcagtctttgcagaagtatcaaagatcaagcaaacgcagacgagggacag
ccaaggcgcttgagacgggaggtagttctgctaacggatgaccggaacctcagggtgaag
gctctggccagggacgtgccagtcagggaagttcccgatttcatgcagtgggctgggctc
ggttga
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integrated database retrieval system
