Cardiocondyla obscurior: 139112706
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Entry
139112706 CDS
T10704
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04512
ECM-receptor interaction
cobs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139112706
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139112706
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cobs00535
]
139112706
Proteoglycans [BR:
cobs00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
139112706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kazal_2
Laminin_G_1
Laminin_G_2
Kazal_1
Kazal_CFAI
EGF_laminin
EGF
Laminin_G_3
hEGF
EB
EGF_2
Motif
Other DBs
NCBI-GeneID:
139112706
NCBI-ProteinID:
XP_070529897
LinkDB
All DBs
Position
LG01:1489280..1871476
Genome browser
AA seq
2306 aa
AA seq
DB search
MRRTSSNGLKLDLTENTPGSSLSRLPNLVEHAETCQALSAGTGENLSSKLPNVVEGSMDY
GSERRSSRYLEYQEIKSYQDPQSSASAAPAYEAAYHDQPRGYRNYDRKAGVGFDRENLER
YDNRIYPEDGLRYGADRRVDQRTYQESDLDAPYDRTDAQKLSRAYPELQDPSRRYSRDLT
DYEYASRYAEETLKLEPKKDHHHHHHPGKIYEPTASKGYESGVKTHDSAYDLGTCAGQQE
PPPRQYESKYHSVSKMYGTLPRYESSKSYEPTYESRPTYEPKYDEQSYECGGKTYESKYE
LTSSKSYERAKYEGTSSARYQDKSYDQTLKIGELGSSSSGAYVRKHQDQEETGAEKMNGY
RKNNFEAYGVYSDPEDDHGFLADKKGPQYTYKGVVVNVSGESAVVDQKRSKDGRQTEVIR
SPWCRPTILLLLLVLLVVIFVFVAGILLYFNYMSYKPRHPIIEGKDLNFASNNAEPCEKT
YCSWGATCVVSEKGKGVCQCLTECSLTSDPVCGSDDVTYTNHCHLRQISCQNKKNIRVKH
HGACEIKDPCEKLNCSQGSQCVRSRDGKEATCQCLEFCPNLGDHEGSGPVCGTDGIDYPT
LCDLNRAACEKGANITVAFRGKCDPCGSIECVEPEVCQLNDSRQPVCRCGEQCGLELSPV
CGSDGKTYSNECNLRQEACRSRLPLKKIYNGACSSGHNPCETAKCSFYEQCAINRQGIAN
CECRPECEPVMRPVCARGGTTYTSMCELKRQACLTRSNIEVAYVGTCGSRGPCSEKVCQW
GAICAEIGGSAVCECPTCPAEFQPVCGDDGISYSNECKLRLEACQHRREIRVLYPGLCNG
CENKKCEFYSECESDNGGEAKCVCPSKCESSVKEPSGTEKVCGSDGVTYDNECALKRASC
TNQSLVNISYVGACELCARVKCDHGAHCVAGECVCPKVCPESSGELVCGSDAKTYQSECE
LQRAACGRDPKLPALHVIFYGDCAERLAAAALTTKSTPTVTRVVTTIADVTSTQEREACK
DIHCDFEATCELGPDKFPRCSCRFDCASISPENMRPVCGSDLRIYSSLCAMKMEACQRQQ
ELRLRPLDLCQGMETKPCNGDSPLVDSEGKEYDCGSGPERKDCPSNSYCHQTPRFARCCK
KVHGIQVVKCADSWHGCCPDGKTAARGPDGAGCPSLCGCNRLGSVSDTCNPETGQCECKP
GVGGLKCDRCMPGYWGLPKISEGHQGCIPCGCSLFGSVREDCEQMTGRCVCKPDIQGQKC
TICNDHNKILTSTGCYSADMTPPVPTSCNELECYSGGHCTEIGGVNCVCPSACPADMPSV
PVCGSDGQTYDNECELRLYACRHQADVVTQAFGHCRDDPMVNTDFPVKRYTAVQYTQPAA
AMSPLSKSTRHLLVPEPDPRYYYTHRAHQETITIDRDNLKHGVAAVYRPTPATIRVVTAL
LGDLCTDDKDCTIPNSECSNGGCICSEGYAETSDRQECFANYVPVTPTQEFRACLSYPCH
MTSTCIDLPSATFVCICRPNYTGLLCDEEINKRDYEIPSFDGKSYVRMNRLKAYHKFSIE
VEFKTYADNGIILYNQQKNDGTGDFVSLAIVDGYVQFRYNLGNGPVILTSPERVTMKTFH
RVAAKRYHKDGVLIFNDGEDVAGQSQGMLKSLDLNQDTFIGNMPTNFTKVYDNIGTNHGL
LGCIRKLKINRNNIDLHVGRDRDVLESYRVKECGDNACANLPCQNGATCQPIFEEDLCNG
RDCRRLQKRGKNRNNRGSNGKGIEVNIVRCRGSHCTSIDQRRTKKNARKSDYDSELQYEK
NYDHSNYAVEKYDSPDYRCICPPQFTGRNCEESLDPCIGEPCQNGATCDILPQGGYVCKC
PPGRTGEHCEIMDAELTELLIPEMNGNGYLELPCLEGVAKAFSIELWFLTRANDGLLLYN
GQLNNGRGDFISLNLVHGRLEFRFNLGSGIANITSPDPVSRDMWHCVRINRLGREGVLQL
DDGTVARGLSGSPLTELNLEMPLYVGGVKHWREVHRLSGAWTGLVGAVQRLMVNGKTYQN
LAVNITQHNTEIYDGLPCPSNENPCHNGGVCFPLLNSYLCKCASGYNGLHCEFFMGYDVS
GTEISERPVRFEGDNFLQFKHRYGRSTNSTNTTLGEYFEESYSDYDLEEDVDYEYDSYDY
TERRGQQSNKFELRLRTIHPEGLIAWIGRGKMEHLFISLHDGHVVLTYKSKIDEEISIKS
KERVDDGVFHHIRASRRRKACTIQIDENVPVKISIETTLLTTNGKIFVGGKPGQRGIKGC
VTDFIVDKRRLQLARRKIDFCHDNDV
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaaccagcagcaacggcctcaagctcgacctgacggagaacacgccaggtagc
tcgttgtcgcggctgccgaatctggtcgagcatgcggagacctgccaggcgctgtccgcc
ggcaccggtgagaatttgagcagcaaactgcctaacgtggtcgagggctcgatggactat
ggtagcgagcggaggtcctcccgctatctggagtaccaagaaatcaagtcctaccaggac
ccccagtcgtccgcctcggcggcgccggcctacgaggcggcctaccacgatcagccgaga
ggataccgtaattatgatcgcaaagcgggagtcggcttcgatcgagagaatctcgagagg
tacgacaacaggatctacccggaggacggactaagatatggcgccgatcgccgcgtggat
cagcgcacctaccaggagtcggacctggacgcgccctacgatcgaaccgacgcgcagaag
ctcagcagagcttatccggaactccaggaccccagcagacgctattcgcgcgacttgact
gattacgaatacgcgtcccgctatgctgaagagacactgaaactggagcctaagaaagac
caccaccaccatcatcatccgggaaagatctacgagccgaccgcctccaagggctacgaa
tcgggcgtgaaaactcacgactccgcttacgacctgggcacctgcgccgggcagcaggag
ccgccgcctagacaatatgagagcaagtatcactcggtcagcaagatgtacggcactttg
cccaggtacgaaagcagcaagtcttacgagccaacctacgagtcgaggcccacctacgag
cctaagtatgacgagcaatcgtacgaatgcggcggtaaaacttacgagtctaagtacgag
cttacgagctcgaagagttacgagagggccaagtacgagggcacctcgtcggcgagatat
caagacaagtcgtacgatcagactttgaaaatcggcgagctgggctcgtcatcgtccggc
gcgtacgtcagaaagcaccaggatcaggaggagaccggcgcggagaaaatgaacggatat
agaaaaaataatttcgaggcttacggagtttactccgatcccgaggacgaccacggtttt
ttggcggacaaaaaagggcctcaatacacctacaagggcgtcgtggtaaacgttagcggg
gaatccgcggtagtcgatcagaaacgatctaaggacggcaggcaaaccgaggtaatcagg
agcccttggtgcaggccaacgattctgctgctcctgctggtgctcctggtcgtcattttc
gtcttcgtcgcgggaatactgttgtactttaattacatgtcctacaagccgcgccatccc
attatcgagggtaaggatctaaatttcgccagtaataatgccgagccttgcgagaagact
tactgctcctggggcgcgacgtgcgtcgtgtccgaaaagggtaaaggtgtgtgtcaatgc
ctcacggagtgttctttaacgtccgatcccgtctgcggatccgacgacgtgacctacacg
aaccactgtcatctgcggcagatcagctgccagaacaagaagaacatccgagtgaagcat
cacggtgcatgcgaaatcaaggatccctgcgagaagctcaactgctcgcaaggctcgcaa
tgtgtgcggagcagggatggcaaggaggcgacctgccaatgcttggaattctgcccaaat
ttaggggatcacgagggatcgggacctgtctgcggcacggatggaatcgactatccgacg
ctgtgcgacctaaatcgagccgcttgtgagaaaggtgctaacatcactgtggcatttcgc
ggcaaatgcgacccgtgcggaagcatcgagtgcgtagagccggaagtctgtcagctgaac
gattcgaggcaaccagtctgccgttgcggcgaacaatgcggcctcgagctctcgccggtt
tgcggtagcgacggcaagacgtattcgaatgagtgcaacctccgacaggaagcatgccga
tcgagattaccgctcaagaagatctacaacggcgcgtgcagctccggacacaatccctgc
gagacggcaaagtgcagcttctacgagcagtgcgcgatcaatcggcaaggaatcgccaac
tgcgagtgtcgtccggaatgcgaaccggtaatgaggcccgtgtgcgcccgcggcggaaca
acctacacgtctatgtgcgagctgaagaggcaggcatgtctgacgaggagcaacatcgag
gtcgcctacgtcggcacatgcggctcaagaggaccctgctccgagaaggtgtgtcaatgg
ggcgcaatttgcgcagaaatcggcggtagcgccgtgtgcgaatgtccgacttgtccggca
gaatttcaacccgtatgcggcgatgatggcatcagctacagtaacgagtgcaagctacgc
ttggaggcatgtcagcatcgacgggagatacgcgttctctacccaggactgtgcaatggc
tgcgagaacaagaaatgcgagttctacagcgagtgcgagagcgacaacggaggagaagct
aagtgcgtctgtccttcgaagtgcgaaagttcggttaaggaaccgtccgggacagaaaag
gtttgcggatccgatggggtgacttacgacaacgagtgcgccctgaaaagggcgtcgtgc
actaaccaaagcctcgtcaacattagctacgtgggtgcctgcgaattgtgcgcgagggtg
aaatgcgaccacggggcgcattgcgtggctggggagtgcgtgtgcccgaaggtctgtcca
gagagcagcggcgagcttgtttgcggtagcgacgcgaaaacctaccagtctgagtgcgag
ctgcagcgtgcagcctgcggcagggatcccaagttgccggcgttgcacgttatattttac
ggagactgcgccgagagattggccgccgcggcattgacgaccaagtcgacgcccacggtg
acgcgtgtggtcaccaccattgccgacgtaaccagcacccaggagcgcgaagcgtgcaag
gacatccactgcgacttcgaggcgacttgcgagctcggcccggataagtttcccaggtgc
agctgcaggtttgactgcgcctccatctcgccggagaacatgcggccggtctgcggtagc
gatctcaggatctattcctccctctgcgccatgaagatggaggcctgccagaggcagcag
gagctgaggctgcgacccctcgatctctgccaaggcatggaaaccaaaccctgcaacggt
gattccccgctagtggactccgagggcaaagagtacgactgcggtagtggaccagagcgt
aaagactgccctagcaatagctactgccaccaaacaccgcgattcgcacgttgctgcaag
aaagttcacggtatccaggtggtaaaatgcgcggactcgtggcatggctgttgcccagac
gggaaaaccgccgcgcgcggcccggacggcgctggttgcccaagtttatgcggttgcaac
cgactcggcagcgtgtctgacacctgcaacccggaaaccggtcaatgcgagtgcaagccg
ggggtgggcggcctcaaatgcgacaggtgtatgccgggctactggggtctgccgaagata
agcgagggccatcagggatgcataccgtgcggttgctcgctgttcggatccgttagagag
gactgcgagcagatgacaggacgttgcgtttgcaagcccgacatccagggacaaaagtgc
acaatctgcaacgatcacaacaaaatactaacgtccaccggctgttactcagcggacatg
acgccgcccgtaccgacgagttgcaacgagctggagtgctattcgggcggccactgcacg
gagatcggtggcgtgaattgcgtttgtccgtctgcctgcccggcggacatgccgtctgtg
ccggtctgcggcagcgacgggcagacctacgacaatgagtgcgagctgcggctctacgcg
tgccgccatcaggccgacgtggtcactcaggccttcggccactgcagagacgatcccatg
gttaatacggacttccccgttaagagatacacagccgtgcaatacacacagccagcagcc
gccatgtctccattgtctaaatccacacggcatctcctggtaccggaaccggacccacga
tattattacacccaccgagctcatcaagaaaccatcaccatcgacagagataatttaaaa
catggagtggcggcggtatatcgaccgacgccggcgacgattcgagtggtcaccgcttta
ctgggcgatctctgcaccgatgacaaagattgcactataccgaacagcgaatgctcaaac
ggcggctgcatatgttccgagggttacgcagaaactagcgatcggcaggaatgtttcgct
aattacgtgccggtgacaccgactcaggagtttcgtgcttgcctatcttatccctgccac
atgacctcgacctgcatcgacttgcccagcgcaactttcgtctgtatctgccgaccgaat
tatacggggctgctttgcgacgaggagatcaacaagcgggattacgagataccttccttt
gacggcaaaagctacgtgcggatgaatcggttgaaagcgtatcacaaattcagcatcgag
gtcgagttcaaaacatatgcggacaatggaatcatactgtataatcagcagaaaaacgac
ggcaccggcgacttcgtctcgctggccattgtcgacggatatgtgcaatttagatataac
ttggggaatggaccggtgatactcacgtcaccggaaagagtgaccatgaagaccttccac
agagtggcggctaaaagatatcacaaagacggagtgctgatttttaacgacggcgaagac
gtagccggacagagtcaaggaatgctaaagtctttggacttgaaccaagatacttttatc
ggaaatatgccaactaatttcaccaaggtttacgataacattggcaccaaccacgggctt
ctcggctgcatacgcaagttgaaaatcaatcggaacaacatagatctccacgtgggtcgc
gacagagacgttctcgagagttatcgtgtcaaagaatgcggcgataacgcgtgcgccaat
ctaccatgtcagaacggtgcgacgtgtcagcctatttttgaggaggacctctgtaacggc
cgagattgcaggagattacagaagagaggtaaaaaccggaacaatcgaggaagtaacggt
aaaggtatcgaggtgaacatagtgagatgcagaggatctcattgcacatcgatcgaccag
agaaggactaagaagaatgcgagaaaaagcgattatgactccgagctgcagtacgagaaa
aattacgatcacagcaattacgcggtggaaaaatacgactcgcctgactacagatgcata
tgcccgccgcaattcactgggagaaactgcgaggaatcgttggacccgtgcatcggcgag
ccctgtcagaacggtgccacttgtgacattctgccgcagggaggatacgtatgcaagtgc
ccgccaggtagaaccggcgagcattgcgagatcatggacgccgaactgacggaactattg
attcccgagatgaatgggaacggatacctggagctaccgtgcctggaaggcgtcgcgaaa
gcgttctccattgagttatggttccttacacgtgcgaacgatggtctcctgctttacaac
ggccagctgaataatggcaggggcgactttatcagcttgaacctagttcacggcaggctg
gagtttagatttaatctcggtagcggtatcgcgaatatcacatcaccggatccggtcagt
cgagatatgtggcactgcgtgaggattaacagacttggcagagagggtgttcttcagctc
gatgatggaactgtcgccagaggattgtccgggagtcctctcacggaactgaatttggaa
atgccactttacgttggtggcgttaagcactggcgagaagttcatcggctgtccggagcc
tggaccggattagtaggcgccgtgcagagactaatggtaaatggcaaaacatatcagaac
cttgccgtgaatattactcaacacaacacagagatttacgatggtctaccctgccccagc
aacgagaacccttgccacaacggcggggtctgctttccactcttgaacagttacctctgc
aaatgcgctagtggttacaatggcttacattgcgaattctttatgggctacgacgtatcc
ggcaccgagatatctgaacgacccgtacgtttcgaaggcgacaacttccttcagtttaaa
catcgttacggaagaagtactaactcgactaacactaccctcggcgagtactttgaggag
tcctactccgactacgacttggaggaggacgtcgactacgagtacgacagttacgattac
acggaacgcagaggacagcaatcgaacaagtttgaactacggcttagaacgatacatccg
gaaggtcttatcgcatggataggacgaggaaaaatggagcatcttttcatatccttgcat
gatggtcatgtggtactcacttataagagtaagattgacgaagagatttcaataaaaagc
aaggaaagagtagacgacggagtcttccaccacatccgagcgtcccggcggcgaaaagcg
tgtacgatccagatcgacgagaacgtgcccgtcaagatctcgatcgaaacgacattgcta
acaactaacggcaagatcttcgtcgggggtaaacccggccagcgcggcatcaagggttgc
gtgacggacttcatcgtcgacaagcgacgactgcaactcgccagacggaagatcgacttc
tgccacgacaacgacgtatga
DBGET
integrated database retrieval system
