Capnocytophaga ochracea: Coch_0319
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Entry
Coch_0319 CDS
T00961
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
coc
Capnocytophaga ochracea
Pathway
coc01501
beta-Lactam resistance
coc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Coch_0319
01503 Cationic antimicrobial peptide (CAMP) resistance
Coch_0319
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coc02000
]
Coch_0319
01504 Antimicrobial resistance genes [BR:
coc01504
]
Coch_0319
Transporters [BR:
coc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Coch_0319
Antimicrobial resistance genes [BR:
coc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Coch_0319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ACU91882
UniProt:
C7M605
LinkDB
All DBs
Position
complement(400939..404097)
Genome browser
AA seq
1052 aa
AA seq
DB search
MIKNFINRPVLSTVVSILIVILGILGIISLPISQYPDIAPVTVQVSANYAGANAETVLKA
VVIPLEEQINGVENMDYITSSASNSGSANITVYFKQGTNGDIAAVNVQNAVSRANSILPS
EVTQSGVTVRKQSSGNLMFLTFFSENKELDDVFLQNYLSINVIPAIKRISGVGDASAFGG
KTYSMRIWLDPQKLQAYGLNPTEVTAAISVQSREAAAGTLGQNSGSSYEYVIKYKGKYTQ
VSEYENIVLKALDGGRILRLKDVAKVELDALGYTGFSESKGRPAVAMGISQTPGSNAHEI
IQNIEKLLDELKPSLPEGITYTINYNANTFLDAAISKVVSTLLEAFLLVFLVVYIFLQDF
RSTLIPAIAVPVSIVGTFFFLNLFGYSVNMLTLFALVLAIGIVVDDAIVVVEAVHAKMEQ
THEKAKPATISAMNEITGAIISITLVMAAVFVPVTFMGGTTGVFYKQFGVTLIVAIVISA
INALTLSPVLCSLFLKPHGNKEYEEKSWFGKFFHKFNIAFNAATRKYGQTFTFFLRHKWV
TLLLLLMAGGGIYFANKSMKSGFVPSEDQGFVMMDVSMIPGASMERVANIMREVNESLSN
IPGVENVTFVTGRGMISGEGSNNGMGFFKLKPFEERSKLPGQDIKSIINNAFRAVANIKD
ANVIFFQPPSVPGFGVGGGVSFVLLDKSGSDISEVNKNAQEFLGALMQRPEIQFAQTSFN
VNYPQYQMDINVERAMQSGITVSTILSTLQNYIGGFYATDFTLYGKQYRVMVQSLPEARK
DLNSLNSLFVKTGSGTMAPITEFVTLTRTFGPQSLSRYNLFTSVSISAQNNPPYSTGDAL
TAVQEVAAQTLNNNYGIDYTGLTREEQNAGSQTILIFLLSLVFTYFILSAQYESYLLPLS
VLFSLPFGIFGAYLGQWFFGLENNIYFQISLIMLMGLLAKNAILIVEFAVQRRRMGESLS
KAAINAAMARLRPILMTSFAFIVGLMPLVFASGVGAAGNRSVATGAAIGQLIGTFFGLVV
IPVFFVFFQAIQESISGHKEKEEIFVEPTGEY
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaactttattaacagacccgtactatcaacggttgtctctatcttaatagtg
attttagggatattggggattatctctttgcctatctctcaatatcctgatatcgcccct
gtaacggtacaggtatcggctaactatgcaggtgccaacgccgaaacagtgcttaaagcg
gtggtgattccgctggaagaacaaatcaatggggtggaaaatatggattatattacctca
tcggcttctaatagtggttcagcaaatattactgtgtattttaaacagggtaccaatggg
gatatcgcggcggtaaacgtgcaaaatgcggtgtcgcgtgccaactctattttgccatct
gaggtaacccaatcgggggtaacggtacgcaaacagagttctggtaacctgatgtttctc
accttcttctctgagaataaagagttagacgatgtatttctacaaaattacttaagcatc
aatgtgattcctgcaattaaacgtatcagtggggtaggggatgccagtgcttttgggggt
aaaacctattctatgcgcatttggttagatccgcaaaaactccaagcctatgggcttaat
cctaccgaggtaactgctgcaatttcagttcagagtagagaagcggctgcgggtactttg
gggcaaaacagcggaagtagctatgaatatgtgattaagtacaagggaaaatacacccaa
gtatcggaatatgaaaatatagtgctcaaagcgttagatggagggcgtattcttcgtctt
aaagatgtagctaaggtagaactcgacgcgctcggatatacaggattttctgaaagcaaa
ggtcgtcctgctgtggcaatgggtatctcgcaaacaccaggctctaacgctcacgagatt
atccaaaatattgaaaaactcttagacgagttgaagccttctttgcccgaagggattact
tatactatcaactacaacgccaacactttcttagatgctgccatttctaaggtggtgtct
acccttttagaggctttcttgttggtgttcttggtagtgtatatcttcttgcaagacttc
cgttctacactcatccctgctattgcggtaccagtgtctatcgtgggtactttcttcttc
ttgaatctctttggctattctgtcaatatgcttaccctctttgccttggtattagctatt
ggtatagtggtggacgatgcgatagtcgtcgtcgaggcggtgcacgccaaaatggagcaa
actcacgagaaagctaaacccgctacaatttcagctatgaacgagattacaggggcgatt
atctctatcacccttgtgatggcagcagtattcgttccggtaacctttatgggaggtact
acaggtgtgttctacaaacagtttggggtaactctgattgtagccatcgtgatttcagct
atcaatgcgcttaccctcagtcccgtgctttgctcgctctttcttaaacctcacggcaat
aaagaatatgaagaaaagtcgtggtttggcaagttcttccacaaatttaatatagctttc
aatgccgctacacgtaaatatggtcaaacctttaccttcttccttcgtcataaatgggta
accttattgctcttacttatggctggaggtggtatctattttgccaataaaagtatgaaa
tcggggtttgtgcccagtgaagaccaagggtttgtgatgatggatgtatcgatgattcct
ggggcttctatggaacgcgttgccaatattatgcgtgaggtaaacgaaagtctttccaat
ataccaggggttgaaaatgttacctttgttactggtcgcggtatgatttcaggcgaaggt
agtaataatggtatgggtttcttcaagctgaaaccttttgaggagcgttctaaactcccc
ggtcaagacattaaatcaattatcaacaatgcttttcgtgcagtagccaatattaaagat
gccaatgtgattttcttccaacctccttccgtgcctggttttggtgtaggaggtggggtg
tcgtttgttctcttggacaaatccggaagtgatatcagtgaggtgaacaagaatgcacaa
gagttcttgggtgccctgatgcaacgtcccgagatacagtttgcccaaacctctttcaat
gtgaactatccacaataccaaatggatattaatgtagaacgcgctatgcagtcaggtatt
acagtgagtactattctatcgaccttacagaattatataggaggcttctacgcaaccgac
tttaccctttatggaaagcaataccgtgtaatggtacaatcgttgcccgaagcgcgtaaa
gacctcaatagcctcaatagcttattcgtgaaaacaggtagtggaacaatggctcctatt
accgagtttgtaactcttacacgtactttcggtccgcaatcgctcagtcgttataacctc
tttacctcggtgtctatttcggctcagaacaaccctccttatagtacaggtgatgccctt
actgcggtgcaagaggtggctgcccaaaccctcaataataattatggaatcgactatacg
ggcttaacgcgtgaagagcagaatgccggttcacaaaccattctcatcttcttgctcagt
ttggtgtttacctattttattctctcggcacagtacgagagttacctattgcctctatca
gtgctcttctcattgccttttggtatctttggagcgtatttaggacaatggttttttggg
ttggagaataatatctatttccaaatctctctcattatgctgatgggactcttagctaaa
aacgcgattttgattgtagaatttgctgtgcaacgccgtcgtatgggagaaagcctctct
aaagcagctatcaatgccgcaatggcgcgtttgcgtccgattttgatgacttcctttgcc
ttcatcgttggtctgatgccattagtatttgcttcaggcgtaggagcagcaggaaaccgt
tcagtagctacgggagctgctattggtcagcttattggtacttttttcggacttgttgtg
attccggtattctttgtattcttccaagcgatacaagagagtataagtggtcataaagaa
aaagaagagatatttgtagagcctactggcgaatattaa
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