Capnocytophaga ochracea: Coch_1109
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Entry
Coch_1109 CDS
T00961
Name
(GenBank) polysaccharide biosynthesis protein CapD
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
coc
Capnocytophaga ochracea
Pathway
coc00541
Biosynthesis of various nucleotide sugars
coc01100
Metabolic pathways
coc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Coch_1109
Enzymes [BR:
coc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
Coch_1109
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
Polysacc_syn_2C
3Beta_HSD
GDP_Man_Dehyd
NmrA
NAD_binding_10
NAD_binding_4
RmlD_sub_bind
Sacchrp_dh_NADP
KR
adh_short
F420_oxidored
Semialdhyde_dh
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
ACU92664
UniProt:
C7M4A9
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All DBs
Position
1311123..1312148
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AA seq
341 aa
AA seq
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MEIKNKTLLITGGTGSFGNAVLQRFLPTDHFKEIRIFSRDEKKQDDMRHALQNPKVKFYI
GDVRDRASVDIAMSGVDYVFHAAALKQVPSCEFFPLEAVKTNVLGTENVLNSAIAYQVKN
VVVLSTDKACYPINAMGISKAMMEKVAIAKGRQLGENAVTTISCTRYGNVMASRGSVIPL
WIEQMKDNKVITLTDPNMTRFMMTLADAVDLVLYAFENGHNGDLFVQKAPAATLTVLAEA
LKQLYKKDTEVKIIGTRHGEKLYETLVAREEMARAEDMGNYFRIPCDTRDLNYDKYFKDG
QEKVSLIEDYHSHNTTHLSVEEMKSLLLKLEEIQNDIQCLK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagataaaaaataaaactcttcttatcacaggaggaacaggctcttttgggaatgct
gtattacagcgtttcctccctaccgatcacttcaaagaaatacgcattttttcacgcgat
gaaaaaaaacaggacgatatgcgccacgccttgcaaaaccctaaagtgaaattctatata
ggcgatgtacgcgatagagcctctgtagatatagctatgtccggagtagattatgtgttc
cacgctgctgcccttaaacaagtgccttcttgtgagtttttccctttagaagctgtcaaa
actaatgtgttaggcacagaaaatgtactcaactcagctatcgcctatcaagtgaaaaat
gtagttgtactttctaccgataaggcttgctaccctatcaatgcaatgggtatttccaag
gcaatgatggaaaaagtagctattgctaaaggtcgtcagttaggagaaaatgctgtaaca
accatttcctgtactcgatatggcaatgtaatggcttctcgaggatcagttattccacta
tggatagaacaaatgaaagacaataaagtcatcaccctaaccgaccccaatatgactcgc
tttatgatgactttagccgatgctgtagacctcgtcctatatgctttcgaaaatggacat
aacggcgacctcttcgtgcaaaaagcccctgctgctacacttaccgtattagccgaagcg
ctcaaacaactctacaaaaaagatactgaagtgaagattataggtactcgccacggcgaa
aaattgtatgaaaccttagtagctcgtgaagaaatggctcgcgctgaagatatgggtaac
tatttccgcattccgtgtgatactcgcgacttaaattacgataagtatttcaaagatggg
caagaaaaagtgtccctcatcgaagattaccactctcataatactacccatttaagcgta
gaggagatgaaatctctattgctaaaattggaagaaatacaaaacgatatacaatgtttg
aagtaa
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