Capnocytophaga ochracea: Coch_1600
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Entry
Coch_1600 CDS
T00961
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc00300
Lysine biosynthesis
coc00550
Peptidoglycan biosynthesis
coc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Coch_1600
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Coch_1600
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
coc01011
]
Coch_1600
Enzymes [BR:
coc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Coch_1600
Peptidoglycan biosynthesis and degradation proteins [BR:
coc01011
]
Precursor biosynthesis
Amino acid ligase
Coch_1600
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
CbiA
SRP54
Motif
Other DBs
NCBI-ProteinID:
ACU93145
UniProt:
C7M765
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All DBs
Position
1908615..1910075
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AA seq
486 aa
AA seq
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MNLKTLLKNITIKTSLYVEDKDITSVCFDSRKAEKGSMFVAITGTQSNGHEYIDQAIRSG
ATAIVCEQLPQQPLPGVSYIVVPNSHSALALIAANFYGNPSEKLILVGVTGTNGKTTIAT
LLYQLFRKAGQKAGLLSTVAVYVDDQCFEATHTTPDPLQLNHYLHLMVEQGVKYCFMEVS
SHGIDQHRTEGLQFAGGIFTNLTRDHLDYHKTFAAYRDVKKRFFDALPATAFALVNNDDK
NGAFMLQNTKAQKKTYALKTHADYKAYIIESRFDGLLLRINQHEVWTKLIGEFNAYNLLA
VYATATLLSIDEIEALTLISAIEPVAGRFQYAVSATGVITIVDYAHTPDALENVLKTIND
IRTHNETLTTVVGCGGNRDKGKRPIMADIATTLSDNVILTSDNPRNEEPETILSEMQQGV
QPQYFHKVQTITDRRQAIQSVCKNAKKGDIILIAGKGHETYQEIKGVRHHFDDFEIVREY
LELYKK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaaaacattacttaaaaacatcactataaaaacttccctttatgtggaagat
aaagatattacctccgtttgcttcgactctcgaaaggcggaaaaaggaagtatgtttgtt
gccatcacgggtacgcaatctaacggacacgaatacatagaccaagctatacgcagtggc
gcaaccgctattgtatgtgagcaattacctcaacaacctttgcctggtgtaagttatata
gtagtccccaatagtcatagtgctttagccttgattgcagctaacttctatggcaatcct
tctgaaaaacttatcttagtaggcgtaacaggcactaacggaaagactaccattgcaacg
cttctctaccaattgtttagaaaagcaggacaaaaagcggggttgctctccacagtggcg
gtatacgtagacgaccagtgctttgaagcaactcacactacccccgaccctcttcaactg
aatcattatctgcacttaatggtagaacaaggggtgaaatattgctttatggaagtgagc
tctcacggcatcgaccagcatcgtactgaaggactacagttcgcaggaggtatcttcact
aacctcacccgcgaccacctcgattatcacaagaccttcgctgcctatcgcgatgtgaaa
aagcgcttctttgatgcgttacccgctaccgcttttgccttagtaaacaacgatgataag
aatggggcttttatgctacaaaataccaaagcccaaaagaaaacatacgcactcaaaact
cacgcagattataaggcatatatcattgagagcagatttgacggcttgctgttgcgtatc
aatcagcacgaggtatggacaaaactcataggtgagtttaatgcttataaccttttggcg
gtatatgctacagctactctattgagtattgacgaaattgaggctcttactcttatcagc
gccatagaacctgtggcaggacgttttcagtatgcagtatcggctacgggagtgattacc
atagtggattatgctcatacccccgatgcccttgaaaacgttctgaaaaccattaacgat
atacgcactcacaacgagaccctcactactgtagtgggctgtggaggcaatcgcgacaaa
ggtaaacgtcctataatggctgatatagctacaaccctcagcgataatgtaatcctcact
tccgacaatcctcgcaacgaagaacctgagacaattctttccgaaatgcaacaaggggta
cagccacaatactttcacaaagtacaaaccatcaccgaccgtcgtcaggcaatacaatcc
gtttgcaagaatgccaaaaagggagacatcattctcatcgccggtaagggacacgaaact
taccaagaaattaaaggcgttagacaccatttcgacgactttgaaattgtacgggaatac
ttggagctctataagaaataa
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