Capnocytophaga ochracea: Coch_1842
Help
Entry
Coch_1842 CDS
T00961
Name
(GenBank) acriflavin resistance protein
KO
K18138
multidrug efflux pump
Organism
coc
Capnocytophaga ochracea
Pathway
coc01501
beta-Lactam resistance
coc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Coch_1842
01503 Cationic antimicrobial peptide (CAMP) resistance
Coch_1842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coc02000
]
Coch_1842
01504 Antimicrobial resistance genes [BR:
coc01504
]
Coch_1842
Transporters [BR:
coc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Coch_1842
Antimicrobial resistance genes [BR:
coc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Coch_1842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
VMAP-M1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ACU93387
UniProt:
C7M8K8
LinkDB
All DBs
Position
complement(2201855..2205031)
Genome browser
AA seq
1058 aa
AA seq
DB search
MDLIKLSIKRPSVLIVMLLLLLLGGFYSYKLLNYELIPKFEVNVVTISTVYAGASPSEIE
STVTKKIEDAVSALENIKKIYSYSYESLSVVVVQLTNDANVDNTLNEAQRKINAIRADLP
DDAKEPSLSKFSLSDLPIVSIGVTSKLSAQELYDLVDKKIQPELSRVPGVAQVNIIGGRK
REIRVSIDAKKLEGYGLSIAQVQQLIAASNMEIPAGKIKTRENSTSIRLLGKLQDVEQLR
NLILASQNGVEIRLSDVADVQDTEEEATKIARIDQENTLLLQVLKQTDANAVSVSELVRK
KMEQVEQTYKNEGVKMLLAEDTSEFTLEAANSVMSDLILAIVLVAVVMFFFLHSLRNALI
VMVSIPTSLIATFIGMYFFGFTLNLMSLVALSMVVGILVDDAIVVLENIHRHMEMGKNKV
RAAFDGSKEIVLTVMAITLVIVVVFVPISLGNAIVVKVLREFCLTVAIATMLSLLMSFTV
VPWLYSRFGKLEHANPNSFLGKMTIGFEGYLKRFTQFFSDLLVWVFANKWKTIILVFFLF
VGSCSFIPTGFIGSEFMPNMDRGKFLVQFELNKDASLEQTNFMTQKAENYLRSLKVEGTN
KPLVESMITTVGQSTSGMGASQATPYKSEIQLTIIDKKERNESTNVIAAKLKRELSQYLV
EAKVKTVPVGMMGAEQAPIALVVTSDNVEVAQQYAEKTAELLKTVEGATEIKLSSESGNP
EINVQIDRDKMAMLGLNIATVGGTMRTAFNGNDDSKFRTGDSEYNINIVFEEGSRQSIDD
IENMMFINSVGQQVKLSQFATIAYASGPTQLERYDKSPSVTVQAQSVGRPTGTIVSEWKT
KIDQLEKPANVHFVFTGDQEMQDEGFGTLFISLFAAILLVYMVMVVLYDSFSRPFVVLFS
IPLSFIGALVALALANMSLNIFTLLGIIMLIGLVAKNAIMLVDFANHRKQEGEDTVTALI
QANHARLRPILMTTIAMVAGMIPLAIANGAGAEVNNGLAIVIIGGLISSLFLTLIVVPLV
YLIFDNIGRRFGKGTKTDYEKLMIADYEHRDIKGEHEV
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggatttaattaaactttctattaagcgtcccagtgtacttattgtgatgctcttgttg
ttgctacttggtggcttctattcgtataagttattgaactacgagctcattcctaagttt
gaagtgaatgtagttacgatctctactgtgtatgcgggagcctctccttcggagattgag
agcaccgtgacaaagaaaattgaggatgccgtttcggctttggaaaatatcaaaaagata
tattcatactcgtacgaaagtctttcggtggtagtagtacaacttactaacgatgcgaat
gtagataacacccttaatgaggcacagcgcaaaattaatgcaataagagctgatttgccc
gatgatgctaaagagccatcattgagtaaattctctctttccgatttgcctattgtgtct
attggggtaacttctaagttatcggcacaagaattgtacgacttggtagataaaaaaata
cagccagagttatcacgtgttccaggagtagcacaagtgaatataataggtggtcgcaaa
cgcgaaatacgcgtgagcattgatgctaagaagttagaaggttatggtctttctattgct
caagtacaacagctaatcgcggcttcgaatatggaaattcctgcgggtaaaattaaaact
cgtgagaatagtacctctatacgtttgcttggtaaattacaagatgtagaacaattgcgc
aaccttatacttgcttcacagaatggagtagagatacgactttcggatgtagctgatgtg
caagacaccgaagaagaagctaccaaaatagcgcgtatagaccaagaaaatactctcttg
ctacaagtattgaaacaaaccgatgctaatgctgtatcggtgagtgagttggtacgcaag
aagatggaacaagtggagcagacttataaaaatgaaggtgtaaagatgctattggctgaa
gataccagtgagtttaccttggaagcagccaactctgtaatgtccgatttgatattggca
attgtattagtagcagtagtgatgttcttcttccttcacagcctgcgtaatgctcttatc
gtaatggtatctatacctacttctctcattgctacttttataggtatgtatttctttggt
tttacactgaacttgatgagccttgttgccctctcgatggtggtaggtatcttggtggac
gatgctattgtagtattagaaaacattcaccgtcatatggagatgggtaagaataaagtg
cgtgctgcttttgatggctctaaggaaattgtgcttactgtaatggcaattaccttagta
attgtggtagtgttcgttcctatttcattaggtaatgctattgtagtaaaagtattgcgt
gagttttgtttgactgtagctattgctacaatgctttcattattgatgtcttttacagta
gtcccttggttgtactctaggtttggaaaattagagcacgcaaatcccaattcattttta
ggaaagatgaccataggatttgaaggatacctcaaacgctttacacagttcttctctgac
ttattggtatgggtatttgccaataaatggaaaactattattttggtatttttccttttt
gtaggttcttgttcattcattcctactggatttatcggatctgagtttatgcctaatatg
gatagaggaaagtttttagtacagtttgaattgaataaagatgcttccttagagcagact
aactttatgacccaaaaagctgaaaattatcttcgtagcttaaaagtagagggtaccaat
aaacctttggtagagagtatgattactactgtaggacagtctaccagtggtatgggagct
tcacaagcaaccccttacaaatcggaaatacagcttactattatcgataaaaaagaacgt
aatgaatcgactaacgtaattgcggcaaagctgaaacgtgaactgagtcagtatttagta
gaagctaaagtgaagactgtaccggtaggaatgatgggagccgaacaagcaccaattgct
ttggttgttacttctgacaatgtggaagtagcccaacagtacgctgagaaaacggctgag
cttcttaaaactgttgaaggtgctactgaaattaagctttcctcagaatctggtaatcct
gaaataaatgtgcagatagaccgcgataagatggcaatgttaggacttaatattgctact
gtagggggaacgatgcgaaccgcttttaatggtaatgacgacagtaaattccgtacagga
gattcagaatacaatattaatatagtgtttgaagaaggtagccgtcagtctatagacgat
atagaaaatatgatgtttatcaactcggtgggacaacaggtaaaactatcacaatttgcg
actatagcttacgcttcaggacctacacagctggaacgttatgacaaatctccttcggta
acagtacaagcacaatcggtaggtcgtcctacaggtactatagtttcagaatggaaaact
aagatagaccaattagaaaaacctgctaacgtacactttgtgtttacgggtgaccaagag
atgcaagatgaaggtttcggtaccttgtttatatcgctctttgcagctattctcttagtt
tatatggtaatggtagtattatacgacagtttttcacgaccttttgtggtattgttctct
ataccgctttcgttcattggagctttagtagctttggcattagccaatatgtcactcaat
atctttactcttttaggtatcattatgcttatcgggttggttgctaagaacgcgattatg
ttagtagactttgccaaccaccgcaagcaagaaggagaagatactgtaactgcattaata
caagcaaaccacgcgcgtttacgccctatcttgatgacgactatcgcaatggtagcaggt
atgattccgcttgctattgccaatggagcaggtgccgaagtgaacaatggtttggcgatt
gtaattataggtggacttatttcctcattgttcttaacacttattgtagtgcctttggta
taccttatttttgacaatattggcagacgtttcggtaaaggtactaagactgattacgaa
aaactgatgattgctgattacgagcacagagacatcaaaggcgaacacgaagtataa
DBGET
integrated database retrieval system
