KEGG   Capnocytophaga ochracea: Coch_2158
Entry
Coch_2158         CDS       T00961                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
coc  Capnocytophaga ochracea
Pathway
coc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:coc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Coch_2158
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:coc03400]
    Coch_2158
Enzymes [BR:coc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Coch_2158
DNA repair and recombination proteins [BR:coc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Coch_2158
 Prokaryotic type
     Coch_2158
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH
Other DBs
NCBI-ProteinID: ACU93702
UniProt: C7M3S6
LinkDB
Position
2574868..2575497
AA seq 209 aa
MKKAEKVNFIIDTLESIYPEITIPLQHKDPYTLLIAVLLSAQTTDARVNQITPILFSKAD
NPYDMVLLSVDEIQEIIKPLGLAPMKSKGIHGLSQILIDKYNGEVPQTFEALEALPSVGH
KTASVVLAQAFGIPTFPVDTHIHRLMHRWKLSDGSSVVQTEKDAKRLFPKEKWNKLHVQI
ILYGREYSPARGWNMEKDIITKTIIQSKK
NT seq 630 nt   +upstreamnt  +downstreamnt
atgaaaaaagctgaaaaagtaaactttatcattgatacactggaaagtatctatcctgaa
attactatacccctacaacacaaagacccttatacgctactgatagccgtactcttatcg
gcacaaactaccgatgcacgggtgaaccaaatcacgcctattctatttagcaaagcggac
aatccgtatgatatggtactactttcggtagacgaaatacaggagattatcaaaccctta
gggcttgcccctatgaaatctaaaggtattcacgggctttcccaaatactcatagacaaa
tacaacggcgaagttcctcaaacctttgaggctttagaggctctcccctcagtaggacat
aaaactgccagcgttgttcttgcacaagcctttggcattccgaccttccccgttgatacc
catatacaccgactgatgcaccgctggaaactttccgacggtagctcggtagtgcaaaca
gagaaagatgccaaacgactcttccccaaagaaaaatggaacaaactgcacgtgcaaatc
atcttgtacgggcgcgaatacagtccggcgagaggctggaatatggaaaaagatattata
accaaaaccattatacaatcgaaaaaatga

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