Comamonas odontotermitis: LAD35_01045
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Entry
LAD35_01045 CDS
T07833
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00270
Cysteine and methionine metabolism
codo00450
Selenocompound metabolism
codo00670
One carbon pool by folate
codo01100
Metabolic pathways
codo01110
Biosynthesis of secondary metabolites
codo01230
Biosynthesis of amino acids
codo04980
Cobalamin transport and metabolism
codo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LAD35_01045 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LAD35_01045 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LAD35_01045 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LAD35_01045 (metH)
04980 Cobalamin transport and metabolism
LAD35_01045 (metH)
Enzymes [BR:
codo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
LAD35_01045 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UBB17280
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Position
238802..241570
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AA seq
922 aa
AA seq
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MSASASPISVPPMRLSGLEPVFIGEGTLFVNVGERTNVTGSKAFARMILNEQYEEALSVA
RQQVENGAQVIDVNMDEAMLDSKAAMVRFLNLIASEPDIAKVPVMVDSSKWEVIEAGLRC
LQGKGIVNSISMKEGVDKFKHEAKLIKRYGAAAVVMAFDEKGQADTYQRKVEICERAYRV
LVDEVGFPPEDIIFDPNIFAVATGIEEHNNYAVEFIEATRWIKQNLPGAKVSGGVSNVSF
SFRGNDPVREAIHTVFLYHAIQAGMDMGIVNAGMVGVYDDLEPQLRERVEDVVLNRRPDA
AERLLEIAEAAKGAAKDDSKKLEWRGTPEHPKTVGERLSHALVHGITDFIVADTEEAYQQ
IVVQGGGRPLHVIEGPLMDGMNIVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPYIEEEK
RQQEAAGLDVSSKGKIVIATVKGDVHDIGKNIVTVVLQCNNFEVINMGVMVPCHEILARA
KAEGADIIGLSGLITPSLEEMQYVAGEMDKDDYFRIKKIPLLIGGATCSRVHTAVKIAPK
YDGPVVYVPDASRSVSVAQSLLGEGKQAYLSELEADYDKVRHQHANKKKTPLWPLEKARA
NATPMDFAAHPPVVPRALGRRVFKNFDLAEIARYIDWAPFFQTWDLAGSYPAILDDEVVG
EEARKVLADAQAMLKKIIEGRWLTANGVMALYPANRVGDDIVFYSDESRTAELMTWYGMR
QQTEKQVIDGPDGRPLMRPSRCLSDFVATKESGIADYAGLFAVTAGIGAEKKDKEFQDAL
DDYSGIMFKALADRLAEAFAECLHERVRKDLWGYAADEALSNEQLIKEQYKGIRPAPGYP
ACPDHTAKIDLFQLLDAKDIGMELTDSLAMFPASSVSGFYLGSPEATYFNVGQIGEDQLA
DMAERRGMDIEELRRKLAPNLG
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtctgcttctcccatttccgtcccacccatgcgcctgtcgggcctggagccc
gtcttcatcggcgagggcacgctgttcgtcaacgtgggcgagcgcaccaacgtcaccggc
tccaaggctttcgcgcgcatgatcctcaatgagcagtatgaggaggcgctgtcggtggca
cgccagcaggtggaaaacggcgcccaggtcatcgatgtgaacatggacgaggccatgctc
gacagcaaggccgccatggtgcgctttctgaacctgattgcttccgaacccgacattgcc
aaggtgccggtgatggtcgattcgtccaagtgggaggtcatcgaggccggcctgcgctgc
ctgcagggcaagggcatcgtcaattccatctccatgaaggagggggtggacaagttcaag
cacgaggccaagctcatcaagcgctacggcgcagccgccgtggtcatggccttcgatgag
aaaggccaggcagacacctaccagcgcaaggtcgagatctgcgagcgcgcctaccgcgtg
ctggtcgatgaagtgggatttccgcctgaagacatcatcttcgaccccaatatctttgcc
gtcgccaccgggatcgaggagcacaacaactacgcggtcgagttcatcgaggccacgcgc
tggatcaagcagaacctgcctggcgccaaggtgagcggtggcgtgtccaacgtgagcttt
tccttccgcggcaatgacccggtgcgcgaggccatccacactgtgttcctctaccacgcc
atccaggcgggcatggacatgggcatcgtcaatgccggcatggtgggcgtctacgacgac
ctggagccgcaactgcgcgagcgcgtggaagacgtggtgctcaaccgccgccccgacgcc
gccgagcgcctgctggagatcgccgaagccgccaagggcgcagccaaggacgatagcaag
aagctcgaatggcgcggcacgcccgagcaccccaagaccgtgggcgagcgcctgtcgcat
gcgctggtgcacggcatcaccgatttcatcgtcgccgataccgaagaggcctaccagcag
atcgtggtgcaagggggcggacgcccgctgcacgtgatcgaaggcccgctgatggacggc
atgaacatcgtgggcgacctcttcggcgcgggcaagatgttcctgccccaggtggtcaag
agtgcgcgggtgatgaaacaggccgtggcccacctcattccctatatcgaagaagaaaag
cgccagcaggaagcagcgggcctggacgtatcgagcaagggcaagatcgtcatcgccacc
gtcaagggcgatgtgcacgacatcggcaagaacatcgtcaccgtggtgttgcagtgcaac
aacttcgaggtcatcaacatgggcgtgatggtgccctgccacgagatcctggcccgcgcc
aaggccgagggcgcagacatcatcggcctgtcaggcctgatcacccccagcctcgaagag
atgcagtacgtggcgggcgagatggacaaggacgactacttccgcatcaagaagattccg
ctcctgatcggcggggccacctgctcgcgcgtgcacacggccgtcaagattgcgcccaag
tacgacggccccgtggtctacgtgcctgatgcctcgcgcagcgtgagcgtggcgcaaagc
ctgctgggcgaaggcaagcaggcctacctgagcgagctggaggccgattacgacaaggtg
cgccaccagcacgccaacaagaagaagacgccactgtggcccctggagaaggcacgcgcc
aacgccacgcccatggattttgccgcccacccgcctgtggtgccgcgcgcactgggccgc
cgcgtgttcaagaatttcgacctggccgagatcgcccgctatatcgactgggcaccgttc
ttccagacctgggacctggctgggtcctaccccgccattcttgacgacgaggtggtgggc
gaggaagcgcgcaaggtgctggccgatgcgcaggccatgctcaagaagatcatcgagggc
cgctggctcaccgccaatggcgtgatggcgctgtaccccgccaaccgcgtgggcgatgac
atcgtgttctacagcgatgaatcgcgcacggcggaactgatgacctggtatggcatgcgc
cagcagaccgaaaagcaggtgatcgatggcccggatggccggcccctgatgcgccccagc
cgctgcctgtcggatttcgtagccaccaaggaatcgggcattgcagactacgcgggcctg
tttgccgtgacggccggcatcggcgccgagaagaaggacaaggagttccaggacgcgctg
gacgactactcgggcatcatgttcaaggccctggccgaccgcctggccgaggcctttgcc
gaatgcctgcacgagcgcgtgcgcaaggacctgtggggttacgccgcagatgaggccttg
agcaacgagcagctcatcaaggagcagtacaagggcatccgccccgcgcccggttacccg
gcctgccccgatcacacggccaagatcgacctgttccagctgctggacgccaaggacatc
ggcatggagctgaccgacagcctggccatgttccccgcatcgagcgtgagcggcttctac
ctgggaagccccgaggccacctacttcaacgtgggccagatcggcgaagaccagctggcc
gacatggccgagcgccggggcatggacatcgaggagctgcggcgcaagctggcgcccaat
ctggggtga
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