Comamonas odontotermitis: LAD35_02210
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Entry
LAD35_02210 CDS
T07833
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
codo
Comamonas odontotermitis
Pathway
codo01501
beta-Lactam resistance
codo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LAD35_02210
01503 Cationic antimicrobial peptide (CAMP) resistance
LAD35_02210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
codo02000
]
LAD35_02210
01504 Antimicrobial resistance genes [BR:
codo01504
]
LAD35_02210
Transporters [BR:
codo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LAD35_02210
Antimicrobial resistance genes [BR:
codo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LAD35_02210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UBB17498
LinkDB
All DBs
Position
complement(483996..487238)
Genome browser
AA seq
1080 aa
AA seq
DB search
MSKFFIHRPIFAWVIAIFVVLAGIVSITRLPVAQFPSVAPPTITVTAAYPGATAQTLTDS
VLQLIEREINGAEGLMYMESSASATGSGTLTVTFAPGTNPELAQVDVQNRLARATPRLPT
IVQSLGVRVDKSMSNFLMILTFQSETGETSRDEISDYVNRNVLPEIQRLNGVGKAQLFAS
GRAMRVWVDPTKLQGYNMSIAQINAAIAAQNQQISGGSLGDTPSLPGTNMNATIVVPGQL
TTPEEFGNVVLRSNSDGSTVRIKDVARVELGAESYGFNSRLDGKPAVALAVQLTSTANAM
ATAKEVYSKMGELESFLPAGVKWSAPYDTSKFVKISIEKVIHTLLEAIVLVFIVMLIFLQ
NIRYTLIPTIVVPIALLGAFAVMYSVGLTINILSMFAMVLVIGIVVDDAIVVVENVERIM
SEEGISPKDATIKAMGQIQGAVVGITVILVTVFIPLAMFSGATGNIYRQFSLVMAISIFF
SGFFALTLTPALCATMLKPIPKGHAHDKKTGLLGPFYNWFNRMFGKATKGYQKTLLGVVK
RTILAFLVYAAVIAGVVFGFKALPTAFLPTEDQGYVISLVQLPPGATQERTSGAMSQLED
YVLKQPETAHIVSILGFSFSGQAQNMGLAFTTLKDWSERTAPGSDATSFAGKALGAMMGL
RDGFIYTLVPPSIPELGNSDGFTFRLQDRGNNGHAALLQARNELIGKASQSPILTGVRFD
GVEDAPQWQVDINRDAVYAQKVNMGDIATTLSTALGSANSTDFPNKGYMQRVTIQADAAT
RMQPEDVMKLTVPNADGKLVELSTLATAKWVTGPMQMSRYNGYPSMSITGQAKPGYTSGQ
AMAEMEKLAAELPQGFGYEWTGQSLDEKKAGSSGMILYAFSILAVFLCLAALYESWSIPL
AVLLVVPLGVLGAVAGMHLRGMPNDIYFQVALITVIGLSAKNAILIVEFAKDLHDQGMSA
LDAALEAGHLRFRPILMTSLAFILGVVPLYIASGASAVSQHEIGTGVFWGMIIGTFMAVF
LVPVFFVEVFRLFGRKNDKDGSGPHGGASPSAPAPGSVSHSAVMNQEDMNSATGKGPRFE
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagttttttattcaccgaccgatctttgcatgggtgatcgcgattttcgtggtc
ctcgcaggtatcgtgtccatcacccgcctgccggtggcgcagttcccatcggttgcgcct
ccgacgattaccgtgacggccgcctaccccggcgccaccgcacagaccttgaccgattcg
gttttgcagctcatcgagcgtgaaatcaatggcgccgaaggcctgatgtacatggaatcc
tctgcctctgccaccggcagcggcacgctgaccgtgacgttcgcgcccggcaccaacccg
gagttggcccaggtggacgtgcagaaccgcctggcccgtgccacgccgcgcctgccgacc
atcgtgcaatcgctgggtgtgcgcgtcgacaagtcgatgagcaacttcctgatgattctg
accttccagtcggagactggagagacctcgcgcgatgaaatctcggactacgtcaaccgc
aatgtcctgcccgaaatccagcgtctgaacggcgtcggcaaggcgcagctgtttgcatcg
ggccgcgccatgcgtgtgtgggtcgatccgaccaagctgcagggctacaacatgtcgatc
gcccagatcaacgctgccatcgccgcgcagaaccagcagatctcgggtggttcgctgggc
gacacccccagcctgccaggcaccaacatgaacgccaccatcgtggtgcctggccagctc
accacgccagaagagtttggcaatgtggtgctgcgctccaactctgatggctccaccgtg
cgtatcaaggatgtggcacgggtggaactgggcgccgagagctatggcttcaactcgcgc
cttgatggcaagcccgctgttgcattggcggttcagctcacctccacggcaaacgccatg
gccacggccaaagaggtctacagcaagatgggcgagctcgagtccttcctgccggctggc
gtgaaatggtctgctccgtatgacacatcgaagttcgtcaagatctccatcgagaaggtg
atccacacgctgctcgaagccatcgtgctggtgttcatcgtgatgctgatcttcctgcag
aacatccgctataccctgatcccgacgatcgtggtgcccatcgcattgctgggcgcattt
gcagtgatgtacagcgtggggctgacgatcaacattctgtcgatgttcgccatggtgctg
gtgatcggtatcgtcgtggacgatgccatcgtggtggtggagaacgtcgagcgcatcatg
tctgaagaaggcatatcccccaaggacgcgacgatcaaggccatgggccagatccagggc
gccgtggtcggtattaccgtgattctggtgacggtgttcattccgctggccatgttctcg
ggcgctaccggcaacatctaccgtcagttctcgctggtgatggcgatctcgatcttcttc
tccggcttctttgcgctgaccctgacgcctgcgctgtgcgccaccatgctcaagcccatt
cccaagggccatgcacacgacaagaagaccggtctgctgggccccttctacaactggttc
aaccgcatgttcggcaaggctaccaagggctaccagaagacgctgcttggcgtggtcaag
cgcaccattctggctttcctggtgtatgccgcagtgatcgctggcgtggtgttcggcttc
aaggctctgcctaccgccttcctgccaacggaagaccagggctacgtgatctcgctggtg
caactgccgccaggcgctacgcaggagcgtacgagcggcgccatgtcgcaactggaagac
tatgtgctcaagcagcctgaaactgcgcacatcgtcagtattctgggcttcagtttctcg
gggcaggcacagaacatgggtctggccttcaccacgctcaaggactggtcggagcgcacg
gctccgggctcggatgcgacctcgtttgcgggcaaggcgctaggtgccatgatgggcctg
cgcgatggcttcatctacacgctggtgccgccttccattccagaactgggcaacagtgac
ggcttcaccttccgactgcaggatcgtggcaataacggccatgcagccctgctgcaggcc
cgtaacgagttgatcggcaaggccagccagagccctatcctcaccggtgtgcgttttgat
ggcgtggaagacgctccgcagtggcaggtcgatatcaaccgcgacgctgtctatgcgcaa
aaggtcaatatgggtgacattgccaccacgttgtccaccgcgctgggctctgccaactct
accgacttcccgaacaagggatacatgcagcgcgtcaccatccaggccgatgccgcaact
cgcatgcaacctgaagacgtgatgaagctgacggtgcccaatgccgatggcaagctggtc
gagctgtccacgctggcaactgccaagtgggtcaccggtccgatgcagatgtcgcgctac
aacggctatccgtccatgagcatcaccggccaggccaagcccggctacaccagcggccag
gccatggccgaaatggaaaagctcgctgccgaattgccacaaggctttggctatgagtgg
accggacagtcgctcgatgagaagaaggcgggttcgtcgggcatgatcctgtacgcgttc
tcgatcctggcagtgttcctgtgcctggcagcactctacgagagctggagcatcccgctg
gccgtgctgctggtggtgcctctgggtgttctgggtgcggtggcaggtatgcacctgcgc
ggtatgcccaacgacatctacttccaggtggcgctgatcaccgtgattggtctgtcagcg
aagaacgcgattctgatcgtggagttcgccaaggatctgcacgaccagggcatgagcgct
ttggacgcggcactggaagccggtcacctgcgcttccgcccgattctgatgacctcgctg
gctttcattcttggcgtggtgccgctctacatcgcctcgggtgcgagcgcggtcagccag
catgaaatcgggacaggcgtgttctggggcatgatcatcggcaccttcatggccgtgttc
ctggtgccggtgttctttgtggaagtgttccggttgttcggccgcaagaatgacaaggac
ggctctggcccccatggcggcgcctcgccatcggcacctgctcctggctccgtctcgcac
tccgcagtgatgaaccaagaagacatgaactccgcaacggggaaaggacctcgttttgaa
taa
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