Comamonas odontotermitis: LAD35_03130
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Entry
LAD35_03130 CDS
T07833
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00300
Lysine biosynthesis
codo00550
Peptidoglycan biosynthesis
codo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LAD35_03130
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LAD35_03130
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
codo01011
]
LAD35_03130
Enzymes [BR:
codo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LAD35_03130
Peptidoglycan biosynthesis and degradation proteins [BR:
codo01011
]
Precursor biosynthesis
Amino acid ligase
LAD35_03130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UBB17655
LinkDB
All DBs
Position
691504..693024
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AA seq
506 aa
AA seq
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MNATPQLLRSVDEAMAWLKARVTGGTLQTDSRKVQPGDAFIAWPGGVTDGRAYVAQAVQR
GAAACLVEQAGMEQFDFAGMPVAAMPELKAATGKIANAWFGEPSQSLDVLAITGTNGKTS
ISWWLAQAVAHLAEAGVLPHRGSALVGTLGVGIPPHQLDVTGMTTPDPVLLQRAFRNFVD
AGYGACAIEASSIGIEEHRLAGTRIKAAIFTNFTQDHLDYHGNMDAYWAAKRALFAWPGL
QAAVVNVDDPKGAQLATELAAEALDLWTVSIADDSAARLSARDIRAGERGLVFEVVEGGK
PVTLHSQVIGQYNVLNLLEVIACVRALGVGLQQAVDACAGMAAVPGRMEQVTEAGAPLIA
VDYSHTPDALEKALQALRPLAAQRAGKLWCVFGCGGNRDATKRPQMGRIAQTQADEVIVT
SDNPRGEAPLAIIEDIVQGMSKSAHWHVQADRAAAIGEAVCRAASEDVILVAGKGHEDYQ
EIAGVKHPFLDTAQAKAALAKRKEQL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgactcctcaactgctgcgcagcgtggatgaagccatggcttggctcaaggct
cgtgttaccggtggtaccttgcagaccgacagccgcaaggtgcagcccggcgatgccttc
attgcctggcctggcggcgtcaccgatggccgtgcctacgtggcgcaagccgtgcagcgt
ggcgctgctgcgtgcctggtcgagcaagctggcatggagcaattcgatttcgcgggcatg
cctgtggcggccatgcctgaactcaaggcggcaacgggcaaaattgccaacgcatggttt
ggtgagcccagccagtcgctggacgtgctggcgatcaccggcaccaatggcaagaccagc
atcagctggtggctggcacaagccgtggcgcatctggccgaagcaggggtgttgccgcac
cgcggcagtgcgctggtggggaccctgggcgtcggcatcccaccacaccagctggatgtg
acggggatgaccacccccgaccccgtattgctgcagcgcgcattccgcaattttgtggat
gcgggttacggcgcctgcgccatcgaagcttcgtccattggcatcgaggagcaccggctt
gctggtacgcgcatcaaggctgcgatcttcaccaacttcacccaggaccacctggattac
cacggcaacatggacgcctattgggcagccaagcgtgcgcttttcgcgtggcctggcttg
caggctgcggtggtgaatgtggacgaccccaagggggcgcaactggcgaccgaattggcg
gctgaggcgctcgacttgtggacggtctcgatcgctgacgactcggctgcgcgtctgtcg
gcgcgagacatccgtgctggcgagcggggcctggtgtttgaggtggtggaaggcggcaag
cccgtcacgcttcacagccaggtgatcggtcagtacaacgtgctcaacctgctggaggtg
attgcctgcgtgcgagcgctgggcgtgggcctgcagcaggcagtggatgcatgcgctgga
atggccgctgtgcctggccgcatggagcaggtaaccgaagccggagcgcctctgattgcg
gtcgactactcgcacacgcccgatgcactggagaaagccttgcaggccttgcgaccgctt
gcagcgcaacgcgctggcaagctctggtgcgtattcggctgcggcggcaaccgtgatgcc
accaagcgcccacagatggggcgcattgcgcaaacccaggcagatgaagtgatcgtgacc
agtgacaacccccgcggcgaggcgccattggccatcattgaggacatcgtgcaaggcatg
tcgaaaagcgcgcattggcatgtgcaggccgaccgtgctgccgcaatcggcgaagccgtg
tgccgggccgccagcgaggacgtgatcctggtggcaggcaaggggcatgaagactatcag
gagattgcaggtgtgaagcacccgtttctcgacacagcgcaggcgaaggcggcgctggcc
aagcggaaagaacaactatga
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