Comamonas odontotermitis: LAD35_07565
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Entry
LAD35_07565 CDS
T07833
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18903
outer membrane protein, multidrug efflux system
Organism
codo
Comamonas odontotermitis
Module
codo_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
codo02000
]
LAD35_07565
01504 Antimicrobial resistance genes [BR:
codo01504
]
LAD35_07565
Transporters [BR:
codo02000
]
Other transporters
Pores ion channels [TC:
1
]
LAD35_07565
Antimicrobial resistance genes [BR:
codo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
LAD35_07565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Phage_int_SAM_1
COG6_N
Motif
Other DBs
NCBI-ProteinID:
UBB18482
LinkDB
All DBs
Position
1619116..1620585
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AA seq
489 aa
AA seq
DB search
MDNDMKSMQRIRFLAAPLSALMAALVLAGCASAPPTVAEHAGVAVPASFSEQKSAAAAGW
TTAAPAEAQPRGAWWLAFADPALSALVERAGEANTDVQTAAARLAEARALLRSADAQRQP
QVGASGGAVRQAGATTANGMQPATLVTAGLNFSYEADLFGRLSGASDAARADATAREALL
QSTRLMVQADVAQTYLQLRSLQTERQLVEQSLTAYRETLNLIERRFRAGDAAELDVARMK
TEVSATEAETLALERQQATLTHALAVLVGDVATGFTLASQQGEATLPVIPAGVPATVLAR
RPDVSAAQASVLAAQARVGVAQAAWFPAITLTGNGGYASPELGDLFKWSARSWGIGALLS
LPIFDGGQRAAQEEGARARLEAAVAAQRGQVLAAFREVEDQLSALRLLAGQSQVLGQAVQ
SSERATHLSDVRYRNGLVSQLELLDARRNELRNRRQALQVRTAQYTATVALIRALGGGWE
SGAQLAARS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggataacgatatgaaatcaatgcaacgcatccgattcctggctgcgcccctgagcgcg
ttgatggcggccctggtgctggcgggttgcgcaagcgcaccacccaccgtggcagagcac
gcaggcgtggctgtgcccgccagtttcagtgagcagaaaagcgctgcagcagcaggctgg
acgacggcggcaccggcagaagcacagccgcgcggcgcatggtggctggcgtttgccgac
cccgcactcagcgccctggtggagcgcgcaggcgaggccaacaccgatgtgcagactgct
gcagcgcgtcttgcggaggcccgtgcactgctgcgctcggctgatgcgcagcgccagccc
caggtgggcgcgtcgggtggcgcagtgcgccaggcgggtgccaccaccgctaacggcatg
cagcctgccacactggtcactgccgggttgaacttctcgtatgaggcggatctgtttggc
cgcctctcgggggcgagcgatgctgcgcgtgcagatgccaccgcgcgcgaggcgctgctg
cagagcacccgcctcatggtgcaggccgatgtggcgcagacctatctgcaactgcgttcg
ctgcagaccgagcgtcaactggtcgaacagagcctgacggcctaccgtgagacgctgaac
ctgatcgagcgacgctttcgggcaggcgatgcggccgagctggatgtggcgcgcatgaag
accgaagtttctgccaccgaggctgaaacgttggccctggagcgccagcaggccacgctt
acgcatgcgctggcagtgctggtaggtgatgtggccacgggcttcacgctggcatcgcag
cagggtgaagcgacgcttccggtgattccggcgggtgtgcccgccacggtgctggcacgc
cgccctgacgtatcggctgcccaggcctcggtgctggcggcacaggcgcgggtgggggtg
gcgcaggcggcatggttcccggccatcacgctcacgggcaacggcggttatgcatcgcca
gaactgggcgatctgttcaagtggtcggcacggtcatggggtattggcgctttgctttcg
ctgcccatttttgatggtggccagcgcgccgcgcaggaagagggcgcccgtgcgcggctg
gaggctgcggtggctgcccagcgtggacaggtgcttgccgctttccgggaggtggaggac
cagctcagtgcgttgcgcctgctcgctggccagtcgcaggtgctggggcaggccgtgcag
tcgtccgagcgggccacgcatctgtcggatgtgcgctaccgcaatggcttggtgagccag
ctggagctgctggatgcgcgccgcaacgagttgcgcaaccggcgccaggcgctgcaggtg
cgcaccgcccagtacaccgccacggtggcactcatccgcgcgctgggtgggggctgggag
agcggcgcgcagcttgctgcccgcagctga
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