Comamonas odontotermitis: LAD35_12730
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Entry
LAD35_12730 CDS
T07833
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
codo
Comamonas odontotermitis
Pathway
codo01501
beta-Lactam resistance
codo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LAD35_12730
01503 Cationic antimicrobial peptide (CAMP) resistance
LAD35_12730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
codo02000
]
LAD35_12730
01504 Antimicrobial resistance genes [BR:
codo01504
]
LAD35_12730
Transporters [BR:
codo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LAD35_12730
Antimicrobial resistance genes [BR:
codo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LAD35_12730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
CHDNT
Motif
Other DBs
NCBI-ProteinID:
UBB15726
LinkDB
All DBs
Position
complement(2736369..2739467)
Genome browser
AA seq
1032 aa
AA seq
DB search
MKMRISAWSIQNPIPVVVLFLAIMVAGLLAYRAMPIKLYPDVSFPIVQVAVALPSAAATE
VETQVTRVVEDGVANVARVKHVISTVTQGMSVTFVEFEIGLDPQRAVDEVRAAIDRVRAN
LPASIEPPIVERLDFDAMPLLTYAVSAQGMDDVELNWFIEDVVARRLVALGGVGQVTQVG
GVGRDITVTLDPARLQALGLTAVAVNDALRSHNLDASGGRAQIGAQEQQVRVLAAAPSVE
SLAELVIATRDGRHLRLSDVATVASGASDRRGFAVLNGEAVVGFQVMKTKAASDVNVESA
VAQAVAKLAKEYPGVTFQLVSSGAKNTRESFDATVYTLLEGMLLAAVVVFMFLRDWRATV
IAAVAMPISLIPTFAVIHALGYSLNMLSLLALTLVIGVLVDDAIVEVENIQKRVQAGASP
WRASMEGADAIGLAVVATTLAIAVVFLPVAFMGGYAGPYFREFGVTVAVSVLFSLLVARL
LSPLMCAYLLKPSAQPEAHKPFAGRYRRLLEWTLAHRWISLGAGVLIFVGSLLLASLLPT
GFAPKGDSGTVQISMQGAPGSTTQDMRVAAATLTRLLREQGDVRDVFVSVGSSQRDGDPR
KGAVIVQLKSQRSMTTKAFQDHVRPLLLRVPDVRLSYSESEGGGTQTLQVILGGHDGALL
RRTASDAERELRSLPMLENVHQVAPNPGPELVIRLKPDEAARLGVTPDVVAEVARMASVG
DLDATASKFNTGRQRLSVRVRLPQGALQDVGSIGALRVPTTGGGTVPLSAVADMHFQVGE
SHIDRFDRERRITLEAEVNGASFGQANAAVEALPFLKNLPAGVSRPLYGDAEGMQELFAS
FGLAIMAGIGLIFGVLILLFRSFIKPVIILAALPLSLAGAFLALLATGGELNLPVLIGLL
MLMGLAAKNSILLVEHAVEAERMGKSQTEALLEAAHERTRPIVMTTIAMAMGMLPTALGV
SSGSEFRQPLAVAVIGGLVSSTALSLILVPVVYAVMDDLENWLKPRLVRLVTVPSAQDQR
DLLQTGDPLSPQ
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcgaatatccgcctggtccatacagaaccccattccggtggtggtgctgttc
ctggccatcatggtggctggccttctggcctatcgggcgatgccgatcaaactgtacccg
gatgtctcgtttccgatcgtacaggtggccgtggcattgcccagcgctgctgccacagag
gtcgaaacccaggtgacccgggtagtggaggacggcgttgccaatgtcgccagggtcaag
catgtgatctcgacagtgacccagggcatgtctgtgacctttgtggagttcgagattggc
ctggatccgcagcgtgcggtggatgaggtgcgtgctgccattgaccgggtgcgggccaac
ctgccggccagcatcgagccgcccattgtcgagcgcctggatttcgatgccatgccactg
ttgacttatgcggtgtcggcgcagggcatggatgatgtggagctgaactggttcattgag
gacgtggtggcacgcaggctggtggcgcttggtggcgtggggcaggtcacacaggtaggc
ggcgtgggccgcgacattacggtgacactggatccggcaaggctgcaggcgctggggctg
actgcagtcgcggtcaacgatgcgctgcgttcccacaatctggatgcgtcaggcggccgc
gcccagattggcgcccaggagcagcaggtgcgtgtgctggccgcagcgccatccgtggag
tcgctggcggaactggtgatcgcaacccgcgacggccgtcacctgcgtttgagcgacgtt
gctaccgtggccagtggcgccagcgaccggcgtggctttgccgtgctgaatggcgaggcc
gtggtcggctttcaggtgatgaagaccaaggctgcttccgacgtgaatgtggagtcggcc
gtggcgcaggcagtagccaagctggccaaggaatatcccggtgtgacgtttcaactggtc
tcgtcgggcgccaagaatacgcgcgagagctttgatgccacggtctacaccttgctcgaa
ggcatgttgctggctgcggtggtggtgttcatgtttctgcgcgactggcgtgccacggtc
attgccgctgtggcgatgccgatatcgctgattccgacctttgccgtgatccatgccctg
ggctattcgctcaatatgctgtcgctgctggctttgacgctggtgattggtgtgctggtc
gacgatgcgatcgtcgaggtggagaacatccaaaagcgcgtgcaggccggtgcttcgcca
tggcgtgcgtcgatggagggtgccgatgccattggattggcagtggtcgccaccaccctg
gcgattgcggtggtgtttctgccggttgccttcatgggtggctacgcagggccgtatttc
cgtgagtttggtgtgacggtggccgtatcggttctgttctccttgctggtggcgcgcctg
ctgtcgcccctgatgtgcgcctatctgctcaagccttcggcgcagcccgaggcgcacaag
ccatttgccgggcggtaccgccgcctgctggagtggaccttggcgcaccgctggatctca
ttgggggcgggtgtcctgatttttgtgggatcactgctgcttgcgagtctgcttcccacc
ggctttgcccccaagggcgacagcggaacggtgcagatcagcatgcagggcgcacccggc
tccaccacgcaggacatgcgggttgctgcggcaaccttgacgcgcctgctgcgggagcag
ggcgatgtccgggatgtgtttgtcagcgtgggcagcagccagcgcgatggagatccacgc
aaaggcgcggtgatcgtccagctcaagagtcagcggtccatgaccaccaaggcttttcag
gaccatgtacgccccctgctgttgcgtgtgccggatgtgcggctgagctacagcgaaagc
gagggagggggtacgcagaccctgcaggtgatcctgggcggccatgacggcgcgctgctg
cggcgcacggccagtgatgctgagcgggagttacgcagtctgccgatgctcgagaacgtg
catcaggtggcgccgaaccctggcccggaactggtgatccgtctcaagcctgacgaagcc
gctcgtctgggtgtgacaccggatgtggtggccgaggtggcgcgcatggccagcgtgggc
gatctcgatgctaccgcctccaagttcaataccgggcgccagcgcctgtcggtgcgtgta
cgtctgccgcaaggggcgttgcaggatgtgggcagcatcggcgccctgcgggtgccaacc
accggtggcggtacggttccgctgtctgcagtggctgatatgcattttcaggtgggcgaa
tcgcacatcgaccgctttgaccgggagcgccgcatcacgctggaggccgaggtcaatggt
gcatcgttcggccaggccaatgccgcagtggaggccttgccatttctgaagaacctgcct
gctggggtttcgcggccgctgtatggcgatgctgaaggcatgcaggagctgtttgccagc
tttgggctggcgatcatggctggaatcggcttgatcttcggcgtgctgattctgctgttt
cgcagcttcatcaagccggtgatcattctggctgccttgcctctgtcgttggctggcgct
tttctggccctgctggctacgggaggcgagttgaacctgccggtgctgattggtctgctg
atgctgatggggctggctgccaagaactccatcttgctggtggagcatgccgtagaggcc
gaacgcatgggaaagagccagacagaagccttgctggaagcggcgcatgagcgcacgcga
cccatcgtcatgacgacgatcgccatggccatggggatgctgcctacggcattgggtgtc
agcagtggctcggagttccgacagcctttggctgttgcagtgattggcgggctggtctcg
tcaacggcgctgtcgctgattctggtgccggtggtgtatgcggtgatggacgatctggaa
aattggctgaaaccaaggcttgtcagactggtgaccgtgccgtcggcgcaggatcaacgc
gatttgctgcagacgggcgatccgctttctccacaatga
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