Comamonas flocculans: FOZ74_00275
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Entry
FOZ74_00275 CDS
T06146
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cof
Comamonas flocculans
Pathway
cof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOZ74_00275 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cof03400
]
FOZ74_00275 (nth)
Enzymes [BR:
cof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FOZ74_00275 (nth)
DNA repair and recombination proteins [BR:
cof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FOZ74_00275 (nth)
Prokaryotic type
FOZ74_00275 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_8
Ogg-HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QEA11608
UniProt:
A0A5B8RS27
LinkDB
All DBs
Position
59675..60340
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AA seq
221 aa
AA seq
DB search
MNQASIQAFFATLKAANPHPVTELQYTNVFELLAAVLLSAQATDVGVNKATRRLFPVANT
PAAIVALGLPRLEDYLRTIGLYRTKAKNLMQTCQLLLERHGGRVPRTREALEALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRVSNRTGLAPGKTPLAVELKLLSRVPPEYLPDAHHWLI
LHGRYVCQARLPRCWECSVAPWCDYRPKSIAPQARANQTTS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggcatcgatacaggcattctttgccacgctcaaggcggccaacccccacccc
gtgaccgagctgcaatacaccaacgtgttcgagctgctggccgccgtgctgctgtcggcg
caggcgaccgacgtgggcgtgaacaaggccacgcgccggctctttccggtggccaacacg
ccggcggccatcgtggcgctgggcctgccgaggcttgaagactacctgcgcaccataggg
ctgtatcgcaccaaggcgaagaatttgatgcagacctgccagctcctgctcgagcgccat
ggcgggcgggtgccgcgcacgcgcgaagccctggaggcgctgccgggcgtggggcgcaag
acggccaacgtggtgctcaacgtggccttcggcgagcccacgatggcggtggacacgcac
atctttcgcgtcagcaaccgcaccggcctcgcgcccggcaagacgcccctggccgtggag
ctcaagctgctcagccgcgtgccgcccgaatacctgcccgacgcgcaccattggctgatc
ctgcatggccgctacgtctgccaggcccgcttgccgcgctgctgggaatgcagcgtcgcg
ccttggtgcgactaccggcccaagagcatcgcgccacaggcgcgggcgaatcagacgaca
agctga
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