Cohnella sp. LGH: J4772_11730
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Entry
J4772_11730 CDS
T10185
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cohl Cohnella sp. LGH
Pathway
cohl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4772_11730 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohl03400
]
J4772_11730 (nth)
Enzymes [BR:
cohl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J4772_11730 (nth)
DNA repair and recombination proteins [BR:
cohl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J4772_11730 (nth)
Prokaryotic type
J4772_11730 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QTH45009
LinkDB
All DBs
Position
2796171..2796839
Genome browser
AA seq
222 aa
AA seq
DB search
MNAATLRQVLNTIAEMFPDARCELNHRNPFELTIAVLLSAQCTDETVNKVTATLFEKYRS
PHDYLSVPLEELENDIRRIGLFRNKAANIQKLCRMVIDLHGGDVPRTHEELTALPGVGRK
TANVVMSNAFDVPAIAVDTHVERVSKRLGVAKPDDSVLEVEKKLMRRVPREEWTITHHRL
IFFGRYHCKAQNPKCEVCPVLEHCKEGKARMIASLMKRSVSK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcaacgttaaggcaagtgctgaatacgatagccgagatgtttccggatgcg
cgctgcgagctgaatcaccgcaatccgttcgaactgacgatcgcggtgctgctgtctgcg
cagtgtacggacgaaacggtcaacaaagtgacggctacgctgttcgagaagtaccgatcc
ccgcacgattacttatccgttcccctggaagaattggagaacgatattcgcagaatcggg
ctgtttcgcaataaggcggccaatatccagaagctgtgccgcatggttatcgacctgcat
ggcggggatgtgccgcgcacgcacgaggagctgacggcgctgcccggagtcggtcgcaag
acggctaacgtcgtcatgtccaacgctttcgatgttccggcaatcgccgtggatacccac
gtagagcgcgtatccaagcgtcttggcgtcgccaagcccgacgactcggtgcttgaggtc
gagaagaagctgatgcgcagagtgccgagagaggaatggacgattacgcatcaccggctg
atattcttcggccgctatcactgcaaggcgcaaaatccgaaatgcgaggtttgtccggtg
ttggaacattgcaaggaaggcaaggcacgaatgatagcctccttgatgaagaggagcgta
tcgaagtga
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