Colwellia sp. Arc7-D: DBO93_16135
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Entry
DBO93_16135 CDS
T05422
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola00540
Lipopolysaccharide biosynthesis
cola01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DBO93_16135 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cola01005
]
DBO93_16135 (lpxC)
Enzymes [BR:
cola01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
DBO93_16135 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
cola01005
]
Lipid A
DBO93_16135 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AWB58934
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All DBs
Position
complement(3748646..3749563)
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AA seq
305 aa
AA seq
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MIKQRTLKESVSAIGVGLHKGEKVQITLRPAPANTGIIFRRVDLDPVVDIPATPEAVGET
TLCTCLVNEQGVQISTVEHLLSAVAGLGIDNLIVEVDSPEIPIMDGSALPFVYLIQSVGI
ETSNVAKRFLRITKTIRVEEGDKWAELKPYEGFRVNFAIEFEHPVIVNTCQAMSMDLSSC
SFIKEISRARTFGFMKDIEFLRSHNLALGGSLENAIVLDEYRMLNKDDLRYDDEFVKHKI
LDAIGDLYMSGVSILGELNAFKSGHALNNILLREVFKQVDCWEWVTFEDSAKSPIQYQEI
EATSF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaacgtacgttaaaagaaagtgtctctgccattggtgtagggttacataaa
ggtgaaaaggtgcagataactctccgtcctgcgcctgctaacaccggtattatttttcgc
cgagttgatttagatcccgttgtcgatatccccgcgacaccggaagctgtgggcgaaact
accctttgtacatgtttagtgaatgagcaaggtgttcagatttccaccgtcgaacatttg
ctttctgctgttgcaggtttaggtattgataaccttattgttgaggttgactcacctgag
attccaattatggatggcagtgctttaccgtttgtatatttaatacagtcggtaggcatt
gaaacatcaaatgttgccaaacgctttttacgcattactaaaactattcgcgttgaagaa
ggtgataaatgggccgaattaaagccttatgaaggattccgcgtaaacttcgctattgaa
ttcgaacatcctgtaatcgtaaatacttgtcaagcgatgagtatggacctttcaagttgt
tcgtttatcaaagaaattagtcgtgcacgtacttttggttttatgaaagacattgaattc
ttgcgctctcataatttagcactcggtggcagtttagaaaatgctattgtgctagatgaa
tatcgcatgctaaataaagatgatcttcgctatgatgacgagtttgtaaaacataaaatt
cttgatgccattggtgatttatacatgagcggtgttagtattttaggtgaacttaatgcc
tttaaatctggtcatgcattaaataacatcttgctacgagaagtgtttaagcaagttgat
tgttgggaatgggtgacatttgaagacagtgctaaatcacctattcaatatcaagagatt
gaagcaacgtctttttaa
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