Colwellia sp. PAMC 21821: A3Q33_04995
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Entry
A3Q33_04995 CDS
T04816
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
colw
Colwellia sp. PAMC 21821
Pathway
colw01501
beta-Lactam resistance
colw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
A3Q33_04995
01503 Cationic antimicrobial peptide (CAMP) resistance
A3Q33_04995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
colw03036
]
A3Q33_04995
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
colw02000
]
A3Q33_04995
01504 Antimicrobial resistance genes [BR:
colw01504
]
A3Q33_04995
Chromosome and associated proteins [BR:
colw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
A3Q33_04995
Transporters [BR:
colw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
A3Q33_04995
Antimicrobial resistance genes [BR:
colw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
A3Q33_04995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_CzcB
CzcB_C
Beta-barrel_RND
BSH_RND
Biotin_lipoyl
RND-MFP_C
HH_MFP_RND
BSH_LcnD
BSH_CusB
BSH_YknX
LcnD_C
FixQ
Motif
Other DBs
NCBI-ProteinID:
ARD43716
LinkDB
All DBs
Position
complement(1195935..1196987)
Genome browser
AA seq
350 aa
AA seq
DB search
MFAAISRRLPLLLLVGVLIALVIYLQWPEKAIKQEQHQRVVSVKTTQIALAEFKDSVEAV
GTSRANEQVFITSKYSDLVDEVLFQDGETVQKGDILVRLNSKEEGAKVKELQANLAESVA
QLNRFQDLYKQKATSQSLVDQQEAKTKAISAQLLSAKIKLAEFTIKAPFSGMLGFREISL
GALINVGDVITSLDDLSTIKVDFSIPERYLTTVSIGQRIEATNTAYKEKVFIGKISSIDS
RIDSVTRTLKVRAEIPNADHKLRAGMLLNLQVVRNVEQILQVPESAVIPIEDEHFIFIVE
ADKAIKKKLEIGRRHRGFVEVVAGVEIGTEVVIEGALKLRDGTAVNAQGE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgctattagtcgtcgtttacctttgttattgctcgttggagtattaattgcc
ttagttatctatttgcaatggcctgaaaaagctatcaagcaagaacaacatcaacgagtt
gtatcagtaaaaacgacccaaatagcgttagctgagtttaaagactctgtcgaagctgtc
ggtacttctagggccaatgagcaagtgttcattaccagtaagtattcagatttagttgat
gaagtgctattccaagatggtgaaactgttcaaaaaggtgatattttagtccgccttaat
agtaaagaggaaggagctaaggttaaagagcttcaggcaaaccttgctgaatcagtagct
caactcaatcgttttcaagatttgtataaacaaaaagcaacatctcagtcactcgttgat
caacaagaagcaaaaactaaagccatttcagcacaacttttaagtgccaaaataaaactc
gctgaatttacgattaaagcgccattttccggcatgttaggttttcgcgaaattagcctt
ggtgcgttaataaatgtgggagatgtgattaccagtttagatgatcttagtactattaaa
gttgatttttcaattccagagcgctacctaacgactgtttcaattggccaacgtatagag
gcgacaaatacagcttacaaagaaaaagtatttatagggaaaatttcttcgatagattct
cgtatcgatagcgttactcgtaccttaaaagtaagagccgaaattcctaatgctgaccat
aaactacgtgcgggtatgttgttaaacctgcaagtggttcgcaacgttgagcaaatactg
caagttcctgaaagtgctgttattccaattgaagacgaacattttatttttattgtagaa
gcagataaagccataaagaaaaagttagaaattggccgtcgtcatcgtggttttgttgaa
gttgttgcgggtgttgaaattggtaccgaagtagtcattgaaggtgccttaaaattacgc
gatggtaccgctgtaaatgcgcagggagagtaa
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