Colwellia sp. MT41: CMT41_15600
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Entry
CMT41_15600 CDS
T04159
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
com
Colwellia sp. MT41
Pathway
com00300
Lysine biosynthesis
com00550
Peptidoglycan biosynthesis
com01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
com00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CMT41_15600
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CMT41_15600
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
com01011
]
CMT41_15600
Enzymes [BR:
com01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CMT41_15600
Peptidoglycan biosynthesis and degradation proteins [BR:
com01011
]
Precursor biosynthesis
Amino acid ligase
CMT41_15600
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Paralog
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF5944
SRP54
CbiA
FhbB
Motif
Other DBs
NCBI-ProteinID:
ALO35989
UniProt:
A0A0S2JJ02
LinkDB
All DBs
Position
complement(3679766..3681373)
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AA seq
535 aa
AA seq
DB search
MPKPATQNIIASLAQFGITLTNTLALDGFVGDLHNDSRLLVTGDIFCAIIGHQQDGRQYI
EQALKQGVKLVIRECDSAAEHGELVIASNGNGVVIVNFYQLNQHLFTLTKHYYQAPQKHM
TIVGITGTNGKTTTSQLLAQLFTHANKPCAVIGTNGAGSIDKLAPIENTTPGACQLHQLF
NRFIDEHSVHGKFSHVAMEVSSHALSQQRVQADLFDIAVFTNLSRDHLDYHDSMASYGAA
KKQIFTGDNRQVAVVNFDDEQAKNWLKNWPEQQVLWLYGRADNIECNQHFVTAKHIKHHS
HGVSFTLTSHLGRVVISSPLLGDFNIDNLLAAICVLLIQGTPLSELPDLVRQVSAIAGRM
EVTSANNLATAVVDYAHTPDALEKALQACRQHCSGKLYVVFGCGGDRDKGKRPLMAQAAE
KYADCVVVTNDNPRSEDAQLIANDIIAGFTHPDADTITIILAREQAVLTTLKTAQAGDMV
LLAGKGHEDYVIVAKYDEHGVIIGTEKLAYNERLVVANFYQQHASLATLPNKAKI
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacctgccacacaaaatatcatcgcatctttagcgcaatttggcattactcta
acaaatactcttgctttagatggttttgtcggcgacctgcataacgatagtcgattgctt
gttaccggtgatattttctgcgccattattggccaccagcaagatggtcgccaatatatt
gagcaagcgcttaagcaaggcgttaagttagttattcgtgagtgtgacagtgcagctgaa
cacggtgaactcgttattgcctcaaacggcaacggtgtcgttatcgttaatttttatcaa
cttaaccagcatttatttaccttaactaaacattattatcaagcgccacaaaagcatatg
accatagtgggcattaccggcaccaacggtaaaacgaccaccagtcagttattagctcag
ctgtttactcacgccaataaaccttgcgctgttattggtactaatggtgcgggtagtatt
gataaactagcaccgatagaaaatactacccctggcgcttgtcaattacatcaattattc
aaccgttttattgatgagcactctgtccatggcaagtttagtcatgtcgccatggaagtc
tcttcccatgctttatcacaacaacgtgtacaagccgatttgtttgatattgctgtgttt
accaacttgagtcgtgaccatcttgattatcatgactctatggctagttatggtgcagct
aaaaaacagatttttaccggtgataatcgtcaagttgccgtggtgaattttgatgatgaa
caagcaaagaactggctgaaaaattggccagagcaacaagtgctttggctttatggtcgt
gctgataacatagaatgtaatcagcattttgtcaccgctaagcatattaaacatcatagt
catggcgtctcttttaccctcacaagtcatttaggccgtgttgttattagcagtccatta
ttgggcgattttaatattgataatctactggcggcaatctgcgtcttacttattcaaggt
acgccattaagcgaactccctgatttagttagacaggtcagtgctattgctggtcgaatg
gaagtcacgagtgctaataacttagcgaccgccgtggtcgattatgcccatacacccgat
gcgttagaaaaagcactacaagcctgtcgtcaacattgctcaggaaaactttatgtggtg
tttggctgtggcggcgatagagataaaggtaagagacccttgatggcacaagccgcagaa
aaatatgccgactgtgttgttgttactaatgataacccgcgcagtgaagatgctcagttg
atagccaacgatattatcgccggttttacccatccggatgccgatacaataaccattatt
ttagcaagagagcaagccgtattgactacactgaaaacagcccaagctggcgatatggtc
ttattggcaggtaaaggtcatgaagattatgtcattgtcgccaaatatgatgaacatggc
gtcatcataggcacggaaaaattagcctataacgagcgtttagtggtagcaaatttttat
caacagcacgctagcttggccacattgcctaataaggcaaagatatga
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