Cellulophaga omnivescoria: PBN93_10025
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Entry
PBN93_10025 CDS
T08738
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
comn
Cellulophaga omnivescoria
Pathway
comn00300
Lysine biosynthesis
comn00550
Peptidoglycan biosynthesis
comn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PBN93_10025
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PBN93_10025
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
comn01011
]
PBN93_10025
Enzymes [BR:
comn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PBN93_10025
Peptidoglycan biosynthesis and degradation proteins [BR:
comn01011
]
Precursor biosynthesis
Amino acid ligase
PBN93_10025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
CbiA
DUF3440
Motif
Other DBs
NCBI-ProteinID:
WBU88207
LinkDB
All DBs
Position
2258933..2260396
Genome browser
AA seq
487 aa
AA seq
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MKLLKDILYGVGIVAVNGTTDTMVNAICFDSRKVGLDDVFVAVKGTLVDGHSYIDTALNA
GANAIICETMPVNLVNGITYVQVKNGNAALAIMASNFYGTPSKNLKLVGVTGTNGKTTIS
SLLYQLFKKAGYKVGLLSTIKIMIDDKEVKATHTTPDAITINKSLAEMSEVGVEFCFMEV
SSHGIHQKRIEGLVFEGAIFTNLSHDHLDYHKTFAEYRDTKKLLFDGLPKSAWALTNIDD
KNGAVMLQNTKAKKQTYALKTYADFRAQILENQFSGQLLKIDDNELWSKLIGDFNAYNML
AIYATAQLLGLEKMEILRLLSELENVDGRFQYYISSNNITAIVDYAHTPDALKNVLNTIN
ALRTGNEDVITVVGCGGDRDKSKRPVMGHIASEMSTKVVFTSDNPRTESPSEILREVEAG
VEAQNTRKVLTIENREQAIKTACQLAQPKDIILIAGKGHETYQETNGVRIDFDDYKIVKQ
LLTSLEK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattattaaaagacatattatacggtgtaggtattgttgctgtaaatggcactaca
gatactatggttaatgctatatgttttgactctagaaaagtagggttagatgatgtgttt
gtagctgtaaaaggaacacttgtagatggtcatagttatatagataccgctttaaatgct
ggtgcaaatgctataatatgtgaaactatgccagttaacctggttaatggtattacatat
gtacaagtaaaaaatggtaatgctgccttggcaataatggcttctaatttttacggtacg
ccgtctaaaaatttaaaactagttggtgtaactggcactaatggtaaaaccactattagc
agcttgttgtatcaattatttaaaaaggcaggttataaagtaggtttgttgtcaaccatt
aaaataatgatagatgataaagaggttaaggcaacacatactactccagatgcaataacc
ataaataagtctttggcagaaatgagtgaagtcggagttgagttttgttttatggaagtt
agttctcacggtattcatcaaaaaaggatagaaggtttagtttttgaaggtgcaattttc
actaatttatctcatgatcatttagattatcacaaaacttttgctgaatatagagatact
aaaaaattgttgtttgatggtttaccaaaatcagcttgggcattaactaatatagatgat
aaaaacggtgctgttatgttgcagaatacaaaggcaaaaaaacagacatacgcattaaaa
acatacgcagattttagagctcaaatattagaaaaccaatttagcggacaattgctaaag
attgatgataatgagctttggtctaaattaattggagattttaacgcctacaatatgctt
gcaatatatgcaactgcacaattgttaggattagaaaaaatggaaattttacgtctttta
agcgaattagaaaacgtagacggaagatttcaatattacatttctagtaataatattaca
gctatagtagattatgctcatactccggatgctttaaaaaatgtactgaacactatcaat
gcattgaggacaggaaatgaagacgttatcaccgttgtggggtgtggtggcgacagagac
aagtcaaaacgtccggttatgggtcatattgcttcagaaatgagtacaaaagttgttttt
acatcagataatccaaggactgaatctccttcagaaattttaagggaagtagaggctggt
gtagaagcacaaaatacgcgcaaggtgttaacaatagaaaatagagagcaggccataaaa
acggcttgtcagttagcacaacctaaagatattattttaatagcaggtaaaggtcatgaa
acataccaagaaactaatggtgtgcgcatagattttgacgattataaaattgtaaaacaa
ttactaacaagtttagaaaagtaa
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