Coprococcus sp. ART55/1: CCU_06330 Help Entry CCU_06330         CDS       T02583                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism coo  Coprococcus sp. ART55/1 Pathway coo03030   DNA replication coo03410   Base excision repair coo03420   Nucleotide excision repair coo03430   Mismatch repair Brite KEGG Orthology (KO) [BR:coo00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CCU_06330    03410 Base excision repair     CCU_06330    03420 Nucleotide excision repair     CCU_06330    03430 Mismatch repair     CCU_06330  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:coo03032]     CCU_06330    03400 DNA repair and recombination proteins [BR:coo03400]     CCU_06330 Enzymes [BR:coo01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CCU_06330 DNA replication proteins [BR:coo03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CCU_06330 DNA repair and recombination proteins [BR:coo03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CCU_06330    NER (nucleotide excision repair)     GGR (global genome repair) factors      CCU_06330    MMR (mismatch excision repair)     DNA ligase      CCU_06330   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CCU_06330 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT PTCB-BRCT BRCT_2 HHH_5 DNA_ligase_ZBD Lar_restr_allev Herpes_UL92 Motif Other DBs NCBI-ProteinID:  CBK82438 LinkDB All DBs Position complement(610816..612852) Genome browser AA seq 678 aa AA seqDB search MEDISRNTSENIKENNDISGNNDNGKIARIKELVKQLNDAAKKYYMEDTEIMSNLEYDAL YDELNALEKETGMVMSNSPTVKVGYEVVSELPKEAHEHPMLSLDKTKDVGALASWLGGQK GVISWKMDGLTVVLTYENGEMIKAVTRGNGEIGEVITNNAKVFANVPHHIPYKGKLTIRG EAVIKYSDFNAINEKITDAESKYKNPRNLCSGSVRQLDNKITKERNVHFFAFNLVDGEDV DFHNSFKYQLDWLEQQGFTVVEHYLTDSAALPDKVREFSEKITENDFPSDGLVLMLDDLA YGRSLGTTAKFPRNAMAFKWADEEAITHLRYVEWSPSRTGLINPVAVFDPVELEGTTVSR ASIHNVSILKSLALGEGDEIAVYKANMIIPQIARNLTMSGNVVIPAACPACGGETEIVRE EGGAASGVETLYCTNQFCPAKKLKSFSHYVSRNALNIDGLSEATIEKFIDEKILEELPDL YKLAAHREHIVELEGFGEKSYNKLVAAVDASRQTNMWRLVNGLGIANVGEATAKLMAKHF ANDMDAMKKADVSAYVEIDGIGQVIAEDIVRYFENEKNCAIIDRLMAELTFVDEVSDTEQ DLAGKVFVITGSLTHFDNRNQLKELIESRGGQVTGSVSAKTSYLINNDVNSTSSKNKKAK SLDVPIISEEDFLELIGQ NT seq 2037 nt NT seq  +upstreamnt  +downstreamnt atggaagatattagtagaaataccagtgaaaatattaaagaaaataatgacatcagtggc aataacgataatggcaagatagccagaattaaagaacttgtaaagcagctcaacgatgct gcaaagaaatattatatggaagatacagagatcatgagcaatctggagtatgatgctctg tacgatgaactgaatgctctggagaaagagaccgggatggtcatgagcaacagcccgacg gtcaaggtaggatatgaggttgtaagtgagctgccaaaggaggctcacgagcatccaatg ctctcacttgataagacaaaggatgtaggtgctcttgcgtcatggcttggcggtcagaag ggcgtaatatcctggaagatggacggactcacagttgttctcacatatgagaacggagag atgataaaagcggttacccgtggaaatggtgagataggcgaggtcatcacgaacaatgcg aaggtatttgcaaatgtacctcatcacatcccgtacaagggcaagctgacgatcagaggc gaggcggtcatcaaatactcggatttcaatgcgataaatgagaagataacggatgcggaa tctaagtacaagaacccgcgaaatctgtgcagcggctcagtgagacagctcgataacaag ataacaaaagagagaaatgtacatttcttcgcttttaatttagtggacggtgaggatgtg gacttccacaattcattcaaatatcagcttgactggttggagcagcagggatttaccgtg gtagaacactacctgacagactcggcggcacttcctgataaggtgagggaattttcagag aagataacggagaatgacttcccatcggatggtctggtactcatgctggatgatttggca tacggaaggagcctgggaaccacagccaagttcccgcgaaatgccatggcgttcaaatgg gcggatgaggaggcaatcacccacctccgctatgtggagtggagtccatcaagaactgga ctcatcaacccggttgctgtatttgacccggtggagctcgagggaacaacagtcagccgt gccagcatacacaacgtcagcatacttaagtcattggcgcttggcgaaggtgatgagatt gcagtatacaaggcgaatatgatcattccgcagattgcaaggaatctaaccatgagcggt aacgtggtcataccggctgcgtgtcctgcatgcggaggagagactgagatagtgagggag gaaggcggtgcagcgtcaggagttgagactctgtactgcacaaaccagttctgccctgcg aagaaactcaagtcattttcacactatgtgtccagaaatgcgttgaatatagacggactc tcagaggcgaccatagagaagttcatagatgagaagatcctcgaggagcttcctgatctg tataagcttgcggctcacagagaacatatagttgaacttgagggatttggcgagaagtcg tacaacaagcttgtggctgcggtggacgcatccagacagacgaacatgtggcgtcttgtc aatggtctcggcattgcaaatgtcggagaggcgacagccaagctcatggcaaagcatttt gcaaatgatatggatgccatgaagaaggcagatgtgtcagcatacgttgagatagacgga atcggtcaggttatagcagaggatatagtcagatactttgaaaatgagaagaattgtgct atcatagataggttgatggctgagcttacgtttgtggatgaggtttctgatacggagcag gatctggcgggcaaggtgttcgtcataaccggttcgctcacccattttgacaacagaaat cagctcaaggaactgatagagagcagaggaggtcaggttacaggttctgtatctgccaag acctcatatcttataaataacgatgtgaattctacatcatccaagaacaagaaggcaaaa agccttgatgtgcctatcatatctgaggaggatttcttagaattgattggacagtag

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