Corynebacterium sp. Z-1: RIU96_08330
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Entry
RIU96_08330 CDS
T11129
Symbol
dop
Name
(GenBank) depupylase/deamidase Dop
KO
K20814
Pup amidohydrolase [EC:
3.5.1.119
]
Organism
core Corynebacterium sp. Z-1
Brite
KEGG Orthology (KO) [BR:
core00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
core03051
]
RIU96_08330 (dop)
Enzymes [BR:
core01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.119 Pup amidohydrolase
RIU96_08330 (dop)
Proteasome [BR:
core03051
]
Prokaryotic proteasome
Bacterial regulatory particles
RIU96_08330 (dop)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Fer4_NifH
Motif
Other DBs
NCBI-ProteinID:
WNI12234
LinkDB
All DBs
Position
complement(1709952..1711445)
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AA seq
497 aa
AA seq
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MTRYMGTETEYGITSPSDSSLSPIVTSTHAVVAYAAMHTGARARWDYEDEAPLKDARGFD
LRRYHTVPIVDANAIGVANVVTSNGARFYVDHAHPEYSSPEVSNAFDAMIYDAAGDVVLG
EAAASIAELHAQGVSVLKDKDPCPPLKFYKNNVDGKGASYGSHENYQYSRHTDFGVLAKA
LIPFFVTRQVIIGAGRVGIGQEGERDGFQISQRADYFEQEISLETTLNRGIVNTRDEPHA
NEEHFRRLHVIVGDANMSQYSNFVKLGMTKLVLDAIEGGVNFSDLALANPVAEIKNVSHD
PSCTHELSLIDGRTLSAIDILRVYRERVAAESDVDKQVLELWGELLGDLARDPLSTADRL
DWTAKWALVSAYLKRGVDIADPKLKALDLQYADIDPATSLHHALVRKGRMRTLVDTETIR
RAAVTPPDDSRAYFRGTVSSTFGDSILASNWQAVLFNTDQGPYKVRIDDVDGFTRADVGE
LIESAGSVDELIAALNR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgctacatgggcaccgaaacggagtacgggatcacgtcgccaagcgattcgagc
ttgagccccatcgttacctccacccacgccgtggtcgcgtacgccgcgatgcacaccggg
gcgcgggcgcgctgggactacgaggacgaggccccgctgaaagacgcccggggctttgac
ctgcgccgctaccacacggtgcccatcgtcgacgccaacgcgatcggggtggccaacgtg
gtcacgtccaacggcgcgcgcttctacgttgaccacgcgcaccccgagtactcctcgccc
gaggtctccaacgctttcgacgcgatgatctacgacgccgccggcgacgtcgtcctcggc
gaggccgcggccagcatcgccgagctccacgcccagggcgtgagcgtgctcaaggacaag
gatccctgcccgccgctgaagttctacaagaacaacgtcgacggcaagggcgcgtcctac
ggcagccacgaaaactaccagtactcgcgccacactgatttcggggtgctggccaaggcg
ctcatcccgttcttcgtcacgcgccaagtcatcatcggcgcaggccgcgtcggtattggc
caggagggcgagcgcgacggcttccagatctcacagcgcgcggactacttcgagcaggag
atcagcctggagaccacgctcaaccgcggcatcgtcaacacccgcgacgagccgcacgcc
aacgaagagcacttccgccgcctccacgtcatcgttggtgacgcgaacatgagccagtac
tcgaacttcgtcaaactcggcatgaccaagctcgtcctcgacgccatcgagggcggcgtc
aacttttctgacctcgcgctagccaaccccgtcgccgaaatcaaaaacgtctcgcacgac
ccgagctgcacgcacgagctttcgcttatcgacggccgcaccctaagcgccatcgacatc
ttgcgcgtgtaccgcgagagggttgccgctgaaagtgacgtcgataagcaagtgcttgag
ctgtggggcgagcttctcggcgacctcgcgcgcgacccgctgagcaccgccgaccgcctc
gactggaccgcgaaatgggccctggtcagcgcgtacctgaagcgcggcgtagacatcgcg
gacccgaagctgaaggcgctcgacctgcagtacgccgacatcgaccccgcaacctcactg
caccacgcgctcgtgcgcaagggcaggatgcgcacgcttgtcgacaccgagacgatccgg
cgcgcggccgtaacaccgccggatgactcacgcgcctacttccgcggcacggtcagctcc
acgttcggcgactcgatcctcgcatcgaactggcaggccgtgctatttaacaccgaccag
ggcccgtacaaggtgcgcatcgacgacgtcgatggcttcacgcgcgccgatgtcggcgag
ctcatcgaatccgccgggagcgtcgacgagcttattgccgccctgaaccgttaa
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