Corynebacterium sp. Z-1: RIU96_10195
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Entry
RIU96_10195 CDS
T11129
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
core Corynebacterium sp. Z-1
Pathway
core00300
Lysine biosynthesis
core00550
Peptidoglycan biosynthesis
core01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
core00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RIU96_10195
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RIU96_10195
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
core01011
]
RIU96_10195
Enzymes [BR:
core01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RIU96_10195
Peptidoglycan biosynthesis and degradation proteins [BR:
core01011
]
Precursor biosynthesis
Amino acid ligase
RIU96_10195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
WHD_1st_SelB
YqeC
Motif
Other DBs
NCBI-ProteinID:
WNI12570
LinkDB
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Position
complement(2095307..2096923)
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AA seq
538 aa
AA seq
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MDQLNQNSAAGDSQAPVSLGELARIAGADVPSPAEGWADVAVSSVGLNAREVAPGGLFAA
LPGTRVHGAQFAAESPARAILTDREGLDIVEAAGDRRPVLVVDDARAVLGEVSAHVYGHP
SRRMTLIGVTGTSGKTTTTYLLERGLIAAGAQVGLIGTTGTRIRGRDVPTSLTTPEAPTL
QALFARMAAEGVTHVVMEVSSHALSLGRVGGTSFDAAGFTNLSQDHLDFHPTMEDYFEAK
AAFFDPASSVAASTSVICVDDEWGERMAQLASRPLRVGTHGQDGLDCSARLIRVRDNGAQ
DIELRIDAHTHAFTLQLPGAFNVANAALATALARVVGADVAQFVRGLEDAAVPGRMERID
AGQGFVAVVDYAHKPAAIAAVLETLREQVDGRIGIAVGAGGDRDTTKRAVMGREAATRAD
FVIVTDDNPRTEDPASIRAAVLDGAREAGSDAEIRECGSRAEAIDQLVAWAQPGDAVVVV
GKGHEVGQIIGETTHHFDDREEMRRALAENGYGENDAHGTHQPQELADGKDFFSHDPT
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtggaccagctcaaccaaaacagcgccgcgggcgactcgcaagcgccggtgtcgcttgga
gagctcgcacgcatcgccggagccgatgttccatcaccggctgaaggttgggcggacgtc
gccgtaagctccgtggggctcaacgcccgcgaggtcgcgccgggagggctgttcgccgcc
ctgccgggcacgcgtgtccacggcgcgcagttcgccgcggagtctcccgcgcgcgccatc
ctcaccgaccgcgagggcctggacatcgtcgaagcggcaggggatcgccgccccgtgctc
gtcgtcgacgacgcccgcgcggtgctgggcgaggtctcggcgcacgtctacgggcacccc
tcgcgccgcatgacacttatcggggtcaccggcacgtcgggcaagacgaccaccacctac
ctgctggagcgcgggctgatcgccgccggcgcccaggtcgggttaatcggcacgacgggg
acgcgcatccgcggccgcgacgttcccacctcgctgaccacgccggaggcgcccaccctc
caagcgctgtttgcgcgcatggcggctgagggcgtgacgcacgtggtcatggaggtcagc
tcgcacgcgctgagcctggggcgcgtgggcggcacctcgttcgacgcggccggatttacc
aatctcagccaggaccacctcgacttccacccgacaatggaggactacttcgaggcgaag
gcggcgttttttgatcccgcctcgtcggtcgcggcgtcgacaagcgtgatctgcgttgat
gacgagtggggcgagcggatggcgcagctcgcgtcgcgaccgctgcgcgtgggcacgcac
ggccaggacgggctcgattgcagcgcgcggctgatccgcgtccgcgacaacggtgcccaa
gacattgagctgcgtatcgacgcccacacccacgcgttcaccctgcagctgccgggggcg
ttcaacgtggctaacgcggcgctcgcgacggcgctggcgcgcgtggtgggcgcggacgtc
gcgcagtttgttcgcgggctggaagacgccgcggtgccggggcgcatggagcgtatcgac
gccggccagggcttcgtagccgtggtcgattacgcgcataaacccgccgcgatcgccgcg
gtgcttgagacgctgcgcgaacaggtcgacggcaggatcggcatcgccgtcggagccggt
ggtgatcgcgacaccaccaaacgcgccgtgatgggccgggaggcggccacgcgcgccgac
ttcgtcatcgtcaccgacgacaacccgcgcaccgaggaccccgcgtcgatccgcgccgcg
gtgctcgacggggcgcgcgaggcgggcagcgacgcagagatcagggaatgcggctcgcgc
gcggaggcgattgaccagctcgtggcctgggcccagccaggtgatgcggtggtggtcgtg
ggcaagggccacgaggtcggccagatcattggggagacgacacaccacttcgacgatcgc
gaggagatgcgcagggctttggccgagaacggctacggtgaaaacgacgctcacggcacc
caccagccgcaggagcttgcagacggtaaggatttcttctcacatgatcccacttga
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