Corynebacterium sp. NML98-0116: BJP05_03610
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Entry
BJP05_03610 CDS
T10271
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
corn Corynebacterium sp. NML98-0116
Pathway
corn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
corn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BJP05_03610
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
corn01007
]
BJP05_03610
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
corn03016
]
BJP05_03610
Enzymes [BR:
corn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
BJP05_03610
Amino acid related enzymes [BR:
corn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
BJP05_03610
Transfer RNA biogenesis [BR:
corn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BJP05_03610
Prokaryotic type
Other AARSs
BJP05_03610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
AOX05356
LinkDB
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Position
828238..831426
Genome browser
AA seq
1062 aa
AA seq
DB search
MSKVGSVYPKVDLTGGSTAFPKMEEQVLKYWNEDDTFQASLKQREDCEEYVFNDGPPFAN
GLPHYGHLLTGYVKDIVPRYRTMAGYYVPRVFGWDCHGLPAELEAEKQLGIKDKAEIENM
GLAQFNEYCAKSVMHYADEWKEYVTRQARWVDFDNGYKTMELPYMESVMWAFKTLYDKGL
IYQGFRVLPYSWAEHTPLSNQETRLDDSYRNRQDPTVTVTMPFTGGREGFAAAETWKQHP
ELHDAAAIAWTTTPWTLPSNLALAVHPDVEYSLVRVGADGEEVVVGKKLLLATELIGAYA
KELGEEREVVATFKGSELEGLEYEPVFDYFRDQEKAFMVLNADYVTTEDGTGVVHQAPAF
GEDDMYTCQEYGIDLVIPVDADGKFTSLVPEYAGKLVFDANRDIIRDLRAKHRVVRDQTI
EHSYPHSWRSGEPLIYMALPAWFVKVTEFRDRMVELNQEIDWIPSHIRDGQFGKWLEGAR
DWNISRTRYWGSPVPAWVSDNPEYPRVDVYGSLEELEKDFGVRPKSLHRPDIDELVRPNP
DDPTGKSMMRRVPDVLDCWFDSGSMPFAQYHYPFENVEEHDARQPADFIVEYSGQSRGWF
YVQHVLATALFDRPAYKKVVAHGIVLGNDGLKMSKSKGNYPNVNEVFDRDGSDAMRWFLM
SSPILRGGNLIVTEQGIREGVRHALLPIWNAYTFLQLYSSEEAKFSVDSQDVLDRYILAK
THDLVAAVKEALDDTRIADACDEVRRFADSLTNWYVRRSRDRFWAGQEEHPEAFDTLYTV
LEILTRVTAPLLPYISEVIWRGLTGGRSVHLADFPSADAIPADPALVSAMDATRAVCSAA
SSVRKSKKLRNRLPLPKLTVALAGSDQLQDFASVIKDEVNVKEVVLTDDVDSVGSFEVVV
NAKVAGPKLGRDVQRAIKNVKAGNYVREGENVVVDGDIVLTPELYTERLVAEDPTSTARV
DATDAVVGLVVLDTELTEELEAEGWAADVIRGLQDARKQEGYEVSDRISVQLCVPSDKVE
WAQRHAEHIAHETLATSFEIVETLNGEAHTIHEGVSAAIAKQ
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggtcggaagtgtctacccaaaggtagatctgaccgggggaagtaccgcgttt
ccaaaaatggaggagcaggtactgaagtactggaacgaggatgatacgttccaggcatcg
ctgaagcagcgcgaagactgcgaagaatatgtgtttaacgacggccctccgttcgccaac
ggtttgccacactacggccacttgctgacgggctacgtcaaggacatcgtgccacgctac
cgcacgatggctggttactacgttccgcgcgtgtttggttgggactgccacggccttccc
gcggagctcgaggctgagaagcagctcggcatcaaggataaggccgagatcgaaaacatg
ggtctggcacagttcaacgagtactgcgccaagtccgtgatgcactacgccgatgagtgg
aaagagtatgtgactcgccaggctcgttgggtggacttcgataacggctacaagacgatg
gaactgccgtacatggagtccgtcatgtgggcgtttaagaccctgtatgacaaggggctg
atttaccagggcttccgcgtgctgccgtactcgtgggcggagcatacgccgctgtcgaac
caagagacgcgtctggatgattcttaccgcaaccgccaggatccgaccgtaaccgtaacg
atgccgtttacgggtgggcgtgaaggatttgctgctgcggagacctggaagcagcaccct
gagctgcacgacgcagctgcgatcgcctggaccactacgccatggacgctgccgtcgaac
ttggcgcttgcggtccatccggacgttgagtattcgctggtccgtgttggtgcggacggt
gaagaggtggtcgtcggcaagaagctgctgctggcgacggagctcatcggcgcgtacgcg
aaggagcttggcgaggagcgcgaggttgtcgccaccttcaagggctccgagctcgagggc
ttggagtacgagccggtcttcgactacttccgtgaccaggaaaaggcgttcatggtgttg
aacgcggactacgtgaccaccgaggacggcacgggcgttgttcaccaggcgcctgcgttc
ggtgaagacgatatgtacacctgccaggagtacgggatcgacctagtcatcccggttgat
gctgatggtaagttcacctcgctggtgccggagtacgcaggcaagctggtttttgacgcg
aaccgtgacatcatccgtgaccttcgtgcgaagcaccgcgtggtccgtgaccagacgatt
gaacactcctacccgcactcctggcgttcgggcgagccgctgatctacatggcgcttccg
gcgtggtttgtgaaggtcactgagttccgcgaccgcatggtggagctgaaccaggagatc
gactggatcccatcgcacattcgcgacggccagttcggtaagtggttggaaggcgcgcgt
gactggaacatttcgcgtacccgctactggggctcaccggtgccggcgtgggtgtcggat
aacccggagtacccgcgtgtggacgtctatgggtcgctcgaagagctggagaaggacttc
ggcgttcgcccgaagtcgctgcaccgcccagacattgatgagctggtccgcccgaaccca
gacgatccgaccgggaagtcgatgatgcgtcgcgtgccggacgtgttggactgctggttt
gattctggttcgatgccgtttgcgcagtaccactacccgtttgagaatgttgaggagcac
gacgctcgtcagcctgcggacttcatcgtggagtactcgggccagtcgcgtggttggttc
tacgtgcagcatgtcttggcgacggcactcttcgaccgtccggcgtataagaaggtcgtt
gcgcacggcatcgtgctgggcaatgacggtctgaagatgtcgaagtcgaagggcaactac
ccgaacgtcaacgaggtcttcgaccgtgatggttccgacgcgatgcgttggttcctcatg
tcttcgccaattcttcgtggcggcaacctcatcgtgacggagcagggcatccgcgagggc
gtgcgccacgcgttgctgccgatctggaacgcgtacaccttcctgcagttgtactcctcc
gaggaggcaaagttcagcgtcgattcgcaggatgtgctggaccgctacatcttggcgaag
acgcatgacctcgtggctgcggtgaaggaggcgctcgacgacacacgcatcgcggacgca
tgtgacgaggtccgtcgcttcgctgactcgctgacgaactggtacgtgcgccggtcacgc
gaccgtttctgggcgggtcaggaggagcatcctgaggcgtttgacacgctgtacacggtc
ctggagatcctgacccgtgtgacggccccgttgctgccgtacatcagtgaggtcatctgg
cgtggcctgaccggtggtcgctcggtgcacttggcggacttcccgtccgcggatgcgatc
ccggcggaccctgcactggtcagtgcgatggatgcaacgcgcgcggtgtgctccgctgct
tcgtctgtgcgtaagtcgaagaagctgcgcaaccgcttgccactgccgaagctcacggtg
gcgctggcgggctcggaccagctgcaggacttcgcgtctgtgatcaaggatgaggtcaac
gtgaaggaagtcgtgctgactgatgacgtcgactccgttggttccttcgaggttgtggtg
aacgcgaaggtcgcgggtccgaagctgggccgtgacgtacagcgcgctatcaagaacgtc
aaggctggcaactacgtccgtgaaggcgaaaacgttgttgtcgacggcgacatcgtgctc
accccggagctctacaccgagcgcctggtggctgaggacccgacgagtaccgctcgggtt
gacgctaccgatgccgtcgttggcctggtcgtgcttgatacggagctgaccgaggagctc
gaggccgagggctgggcagcagacgtgattcgtggtctgcaggacgctcgtaagcaggaa
ggatacgaagtctctgaccgcatctcggtacagctgtgcgtaccttccgacaaggtcgag
tgggcgcagcgccacgctgagcacatcgcgcatgagacgctcgcgacgtccttcgagatc
gtcgagacgctcaacggcgaggcgcacacgattcacgaaggtgtgagcgcagcgattgct
aagcagtaa
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