Corynebacterium sp. NML98-0116: BJP05_05860 Help Entry BJP05_05860       CDS       T10271                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism corn  Corynebacterium sp. NML98-0116 Pathway corn03030   DNA replication corn03410   Base excision repair corn03420   Nucleotide excision repair corn03430   Mismatch repair Brite KEGG Orthology (KO) [BR:corn00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     BJP05_05860    03410 Base excision repair     BJP05_05860    03420 Nucleotide excision repair     BJP05_05860    03430 Mismatch repair     BJP05_05860  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:corn03032]     BJP05_05860    03400 DNA repair and recombination proteins [BR:corn03400]     BJP05_05860 Enzymes [BR:corn01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      BJP05_05860 DNA replication proteins [BR:corn03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      BJP05_05860 DNA repair and recombination proteins [BR:corn03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      BJP05_05860    NER (nucleotide excision repair)     GGR (global genome repair) factors      BJP05_05860    MMR (mismatch excision repair)     DNA ligase      BJP05_05860   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BJP05_05860 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD Nlig-Ia HHH_5 PTCB-BRCT DUF5496 BRCT_2 Motif Other DBs NCBI-ProteinID:  AOX05725 LinkDB All DBs Position complement(1303884..1305932) Genome browser AA seq 682 aa AA seqDB search MNENVNELPANDVDVRRLWDEIASQVRHHRDLYYNSQPVISDAEFDELFQRLVRLEEEHP ELAVPDSPTMQVGAPTGGAFDDVEHLERMMSLDNVFSEAELRDWLAKAPGPYLTELKIDG LSIDLVYENGELVRAATRGDGRVGEDITANAKVIEDIPHQLQGDAPALVEVRGEVFIRPE DFPDLNAARIEEGGKPFANPRNAAAGGLRQKDPEDVKKRKLRMICHGIGAREGFAPKTQH EAYEQMAAWGLPVSEYTKRAATADAVVDAVRYWEQHRHDAIHEMDGLVVKVDAVEEQRQL GATSRAPRWAIAYKYPPEEVTTKLLDIEVSVGRTGRVTPYAVMEPVFVSGTTVAMATLHN PTEVRRKGVLIGDTVVVRKAGEIIPEVLGPVADLRTGEEREFVFPAECPSCGATLAPAKE GDADWRCPNTRSCPAQLAQRLKYLASRGAFDIEALGEKGAQDMIDTGVIQDEGDLFDLTE EDLKKSQVYTTKKGAVNASGRKLLENLDTAKNADFWRVLVALSIRHVGPTAARALASRYG NMEALVDAPLEDLAQTDGVGAIIAESFQEWFRVDWHREIVEKWTAAGVTMEVDAADVAPQ TLEGITVVVTGTLEEYTRDGAKEAIVSRGGKASGSVSKKTDFVVVGENAGSKEQKARELG LRILNEEEFTRLLEQGPEGVED NT seq 2049 nt NT seq  +upstreamnt  +downstreamnt atgaacgaaaatgtgaacgaattgcctgctaatgacgtcgatgtgcgtcgactctgggat gagattgccagccaagttcgtcaccatcgggatctgtactacaacagccaacccgttatt agtgacgccgagtttgatgagcttttccagcgcttggtgcgacttgaggaagagcacccc gagctcgctgttccggactcaccgacgatgcaggtcggtgcgccgaccggcggtgcgttc gacgatgtcgagcacctcgagcggatgatgagcctagataatgttttctcggaggcagag ctacgagactggctggcaaaggcgccgggcccgtatctgacagagctcaagatcgacggg ctttcgatcgacctcgtgtatgaaaacggcgagctggttcgcgctgctacgcgtggtgac gggcgcgtgggcgaggacattacggccaatgcaaaggtcattgaagatattccgcaccag ctgcagggcgatgccccggcgctagtcgaggtgcgaggggaagtttttatccggcccgag gacttcccagatctcaacgctgctcgcatcgaagagggcgggaaaccgttcgcgaatccg cgcaacgcggctgccggaggcttgcgtcaaaaggatcccgaggatgtgaaaaagcgcaaa ctgcggatgatttgccacggcatcggtgcgcgcgaggggtttgccccgaagacccagcac gaagcctacgagcagatggcagcctgggggctgccagtgtctgaatacacaaagcgcgca gcaactgctgatgcggtggtggatgccgttcgctattgggaacagcaccgccacgacgcg atccacgagatggatgggctcgttgtaaaagtcgatgcggttgaggaacagcgccaacta ggagcgacgtcgcgggcgccacggtgggcgatcgcgtacaagtacccgccggaggaggtc acgacgaaactgctcgatattgaggtttccgttgggcgaactggccgagtaacaccgtac gcggtaatggagccggttttcgtgtctggtacgactgtcgccatggcgacgttgcacaat ccgaccgaggtccgccgcaagggcgtcctcattggtgacacggtcgtagtgcgtaaagct ggcgagattatccctgaggtgttgggtcccgtcgcagatcttcgcactggagaggagcgg gagttcgtgttccccgcggagtgcccaagttgcggggcaacgttggcgcctgcgaaggaa ggggatgcggactggcgctgcccgaatacgcgttcatgcccggcccagctggcgcaacgt ctgaagtacctcgccagtcgcggcgcctttgacattgaggcgctgggcgaaaagggcgcg caggacatgattgacactggtgtgatccaagacgagggcgacctgtttgatctcacagag gaagacctcaagaagtcacaggtctacaccacgaagaaaggtgcggtaaatgcttctggc cgcaagctactggagaacctcgacactgcgaaaaatgccgatttctggagagtcctcgtc gcgctttcgattcgacacgtcggtccgaccgcagctcgtgcgctcgcctcccgttacggc aacatggaagcgcttgtcgacgccccactggaggaccttgcgcaaacagacggagtaggc gccatcattgcggaatcgttccaagagtggttccgcgttgactggcaccgcgagatcgtc gaaaagtggacagctgctggcgtgacgatggaagttgatgccgccgacgttgctccgcaa acccttgaggggatcaccgtggtggtgacgggcacgctcgaggaatacacgcgtgatggc gcgaaagaggcgatcgtgtcgcgtggtggtaaggcatcggggtctgtgtcaaagaagacg gactttgtggtcgtcggcgaaaatgccggttcaaaagagcaaaaggcgcgtgagctcggc ctcaggattctcaacgaggaagagttcacccgcctgctcgaacaggggccagaaggagtt gaagactag

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