Candida orthopsilosis: CORT_0A06500
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Entry
CORT_0A06500 CDS
T02488
Name
(RefSeq) Caf16 protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cot
Candida orthopsilosis
Pathway
cot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CORT_0A06500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0A06500
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CORT_0A06500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_29
AAA_23
RsgA_GTPase
AAA_13
AAA_28
Motif
Other DBs
NCBI-GeneID:
14538047
NCBI-ProteinID:
XP_003866476
UniProt:
H8WWP7
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All DBs
Position
1:1446231..1447232
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AA seq
333 aa
AA seq
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MTLENHKNDTSLAIEVNDLTYEFPRGNNNNGNTNKIGLQDITLQISWGTTNLIIGSNGAG
KSTLLRILAGKTLIKKGKLKIGGFDPFEFSTGDGERHYNADINNYITYLGTEWITNSVIK
RDIPVNLLLSSIGGEIYAERRNSLIDILDIDPSWSMINLSDGERRRVQIAMGLIKPWKLL
LLDEVTIDLDVVVRSKLLNYLKSECSDRNCTVVYATHIFDGLGNEWCDRLLHIDSGLLLN
DIDMNQIEFKSGGGEDVDVDVREDRIVISKSNTLHPLALCWLSEDLQRRGSRQDEKEKIH
KRHNDWINSRDGSYFDASDDKLKQYFKNTRSER
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacattggagaatcataagaatgatacgtcactagcaattgaagtcaacgacctcacg
tacgaattccctcgtggcaacaacaataatggcaataccaataaaatcggtttacaagac
ataacattacaaatatcttggggaaccaccaatttaatcattggatccaatggagctggg
aaatcaacgttattacgtattcttgccggaaagactttaatcaaaaaggggaaattaaaa
attggtggatttgatccatttgagttttcgactggtgatggtgaacgtcattataatgca
gatatcaacaactacatcacttatttaggaactgaatggatcaccaactcagtgatcaaa
cgagatataccagttaatctcttgctcagttcaattggaggtgaaatatatgcagagagg
agaaatctgttgattgatatattggatattgatccatcatggtcaatgattaatttatcc
gatggagaaagaagacgagttcaaattgccatggggttaataaaaccttggaaattgtta
cttcttgatgaagtcactatagatttggatgtagttgtacgactgaagttgttgaattat
ttgaaactggaatgtagtgatcgaaattgtaccgttgtttatgcaactcatattttcgat
ggattgggtaatgaatggtgtgataggttgttgcatattgattcagggttgttgttgaat
gatatcgatatgaatcaaattgaattcaagagcggtggtggtgaggatgttgatgttgat
gttagggaagataggattgttattagtaaatccaatacattgcaccctttggcgttgtgt
tggttatctgaagatttacaaagacgtggcctgagacaagatgagaaggaaaagatacat
aagagacataatgattggattaattctcgagatggatcatattttgatgccagtgatgat
aaattaaaacagtactttaaaaatactcgaagtgagaggtaa
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