Candida orthopsilosis: CORT_0B05200
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Entry
CORT_0B05200 CDS
T02488
Name
(RefSeq) Snu114 protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cot
Candida orthopsilosis
Pathway
cot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CORT_0B05200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cot03041
]
CORT_0B05200
Spliceosome [BR:
cot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CORT_0B05200
Complex C
U5 SnRNP specific factors
CORT_0B05200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_C
EFTUD2
GTP_EFTU_D2
MMR_HSR1
Roc
Dynamin_N
ATPase_2
TniB
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
14538686
NCBI-ProteinID:
XP_003867665
UniProt:
H8WZN3
LinkDB
All DBs
Position
2:complement(1123390..1126230)
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AA seq
946 aa
AA seq
DB search
MSDEELYDEFGNLIGEPVKSESDTESQGKDEFEQKGQELVLIENQDESVPGSELAKSNVP
TQDAEIVYVNPTEYSENVPVIVPKLEKKMKLVINEWDLPKLTYSREFMVNTINEVPERIR
NVCIVGSFQSGKTSFVDQFVQKTHTPSDGKKTNFIYSRPLRYLDNNKLEIEREASIKTSP
VTLMLSDSKGRSLVSSFLDTPGHADFGDEVIAGLEVCDGAALVLDVVVGLTFKDKLILEE
VIKRNLPLILVLNKIDKLILELRLPPKDAYFKLFNIIDDVNQYIKKNSTGNYTNLQKLWP
TSNNIIFASSVFGISFALNSFADLYLQNQMSEMQVAELKDKLWGDYFFNYEKSEITTNSD
GGKYCPTFVTFVLEAIYQTATYVLTTEPPHKELGKILWENFGVSIPKAEYKKDVRVLLKS
VFQAVFKHDTGFVDSLEHSIAPPRGSSKTEPMLGKISKFIESPNGESFLALARIFAGKLN
TGDLVKVYVEDEDGEEMRETSVVIKQLYLPGGRYNVPVDGISNTIALIEDFDSSIKKGAT
IVSHDNVKDPVFKLPDYAITSVMKVVVEPINPTQRPLLLEGLDKISKSYLSSVIHVEENG
ETVIVAPGEFYLDCVLHDLRFFFNNDLQIKVSDPMTIFSETCIAQSLTKIPVATSNGEIS
ISVIAEPVSNAALSYEIEKGLIDIHLSKKEMSSILKKFGWDTLAARSVWSFGPDDLIGPD
ILLDDTLDGETDKDQLTKLKPLIVSGFKWSVNEGPLLNEPIRNVQFKILDAQFGENADSF
LNGAQIIPLVRRACYTGLLTAKPRIMEPIYKVDAVCPYKAIRIIKEVLKLRRGHFDKQEP
VEGTPLYHVEGFVPVIDSFGLLSDVKLHAQNKVLMSLVFSHWEIVPGDPFDKTCSLPTLE
PVPEESLSRDFLLKTRKRKDLTGEPTLQKYIDTELYLKLKERDLVL
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaggagttatacgatgaatttggtaacttgatcggagaacctgtgaagtct
gaatcagataccgaaagtcaaggaaaggatgagtttgaacagaagggacaagaattggta
ctcatcgagaatcaagatgaaagtgtcccagggagtgaattagcgaagagcaatgtacca
actcaagatgcagaaatagtttatgttaatcccactgaatattcagagaatgtgccggta
attgttccgaaattggaaaaaaagatgaaattggtcatcaatgaatgggatttaccaaag
ctaacatactcgagagagttcatggtaaacacaatcaacgaggttccagagaggatacga
aatgtttgcattgtggggagttttcaatccggaaagacgtcgtttgttgatcagttcgtt
caaaaaacacatacacccagtgatggtaagaaaacaaacttcatatattcaagacctttg
agatacttggacaacaacaaattagaaatagagcgagaagcttcaataaaaacttcgccg
gttactctaatgctttcagattccaaaggtcgatctcttgtgtcgagtttcttggatact
ccaggtcatgctgattttggtgatgaggtcatagccggactcgaagtgtgtgacggtgct
gctttagtcttggatgtagtagtgggcttaacttttaaagataaattgatacttgaggag
gttattaaacgaaatttacccctaattcttgtgttaaacaagattgataagctaatctta
gagttgagattaccgcccaaggacgcatattttaaactctttaacataatcgatgatgtg
aatcaatacatcaaaaaaaacagtactggaaattacactaacttgcaaaagctatggcct
acctcaaataacatcatttttgcttcgtccgtgtttggcatttcgtttgcattaaacagt
tttgctgacttgtatctacaaaatcaaatgtcagagatgcaagtagcggaacttaaggat
aaattatggggagactacttcttcaactatgagaagagtgaaataacaactaattctgat
ggtggtaaatattgtccaacatttgtcacgtttgttttggaggcgatttaccagactgca
acctacgttttaaccaccgagcctccgcacaaagaattgggcaaaatattgtgggagaat
tttggtgtttctattcccaaagcagagtacaaaaaggatgttagagtacttttgaaatca
gtttttcaagctgtattcaaacacgataccggatttgttgattcgcttgagcattccatt
gctcctcctcgtggctcttccaaaaccgaaccaatgcttgggaagattagcaaatttatc
gaatctcccaatggagaatcatttttagcattggcacgtatcttcgctggaaaactcaac
acgggggatctcgtgaaggtctatgttgaagatgaggatggtgaagagatgagagagact
agtgtcgtgatcaagcagctctatttacccggtggcagatacaatgttccggtagatggt
atatcaaacactatagccttgatagaggactttgactcaagcatcaagaagggtgctacc
attgtgtcacacgataatgtaaaagatccagtgttcaaacttccagattacgccattacg
tcagtgatgaaggtcgtcgttgagcctattaatcctactcaaagaccgctacttcttgaa
gggttggacaaaatttctaaatcatatttgtcatcagtcattcatgtggaagaaaacggt
gaaacagtcattgttgctcctggcgagttttatttggattgcgtattgcatgatttgaga
ttctttttcaacaatgatttgcaaatcaaagtaagtgatccaatgactatcttttctgaa
acatgtatagcccaatcattgactaaaattcccgtggctacttctaacggagagatttct
atttcagttattgctgaaccagtgagcaatgcagcattgagttatgaaattgagaagggg
ttgattgatattcatttaagcaaaaaggaaatgtcgtcgattcttaagaaatttggatgg
gataccttagctgcgaggtctgtttggtcattcggaccagatgacttaataggaccagat
attttactcgatgacactttagatggagaaactgacaaagaccagcttacaaaattgaaa
ccgttgatagtatccggatttaaatggagtgtaaatgaaggtcccttactcaacgagccc
ataagaaatgtccagttcaaaattcttgatgcacagtttggtgaaaatgcagactccttt
ttgaatggtgcacaaataattcccttggtacgtcgtgcctgttacactggtttactaaca
gcaaagccaaggatcatggagccgatatacaaggttgatgccgtatgcccctataaggct
atacgtatcatcaaagaggttctcaaactcagaaggggacactttgataaacaagagcca
gttgagggtactccattgtatcacgttgaaggttttgttccagttattgacagctttggt
ttgctttcagatgtaaagttacatgcgcaaaataaagtgttaatgtccttggtattcctg
cattgggaaatcgttcctggagatccatttgataaaacatgctcattgcctacattagaa
cctgttcctgaagagtctttgtctcgagatttcttgctcaaaactagaaagagaaaggat
ttgactggtgaaccaacattgcaaaagtatatcgacacagagctttatctaaaattgaaa
gagcgggacttggtactttag
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