Chitinophaga oryzae: HF329_05490
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Entry
HF329_05490 CDS
T07451
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
coy
Chitinophaga oryzae
Pathway
coy01501
beta-Lactam resistance
coy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HF329_05490
01503 Cationic antimicrobial peptide (CAMP) resistance
HF329_05490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
coy03036
]
HF329_05490
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_05490
01504 Antimicrobial resistance genes [BR:
coy01504
]
HF329_05490
Chromosome and associated proteins [BR:
coy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HF329_05490
Transporters [BR:
coy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HF329_05490
Antimicrobial resistance genes [BR:
coy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HF329_05490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
DUF4995
YqfD
PS_Dcarbxylase
Motif
Other DBs
NCBI-ProteinID:
QJB30779
UniProt:
A0AAE7D650
LinkDB
All DBs
Position
1317215..1318312
Genome browser
AA seq
365 aa
AA seq
DB search
MRFPSPIIVSVSAAIVLTACQQQPREEAATKKAGSDSVSVFLLKKDTVNKQVTFPAELIP
LERAEMFAKVSGYVGSLKVDIGDKVSKGQLLAVLEAPEAQANYAQANADVQTARSRYLGS
LDAYHRIVNAAKVEGTVAAGELEKARSAMMADSAALNAARSRTTAYGQLKDYLMIRAPFS
GIVTQRNVDPGTLVSAGNSKPLLVVENISTLRLRVPVPEAYTAAGTASPTIDFTVDARPD
VTYQAKLSRKAGAINLANRTETWEFLFQNDQQQLKSGMFANALLKLGRPAPTFLVPASAV
ATNLEKRFVIRLNGGKAEWVDVRNGINPGDKMEIFGSLTAGDTLLVRATDEIKPGTALVP
KFPKK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagatttccttctcctatcatagtgtcagtgtcagcggcgatcgttttgacggcctgt
cagcagcagccgcgcgaagaagctgccaccaaaaaagcaggtagcgattccgtgtcggtt
ttcctgctaaagaaagataccgttaacaaacaggtgacttttcctgccgagctgatcccg
ctggaacgggcggagatgtttgccaaagtaagcggatatgtcggatcactgaaagtggat
ataggcgataaggtgagcaaggggcagctgctggctgtgctggaagcgcccgaagcgcag
gccaattatgcgcaggccaatgcagatgtgcagaccgcccgttcccgttatctgggcagc
ctggatgcttaccaccggattgtcaacgctgccaaagtagaaggaacggtggccgccggg
gagctggagaaagccaggagcgcgatgatggccgacagcgccgcgctgaacgccgcgcgg
tccaggactacggcctatggccagctgaaagactacctgatgatccgtgcaccattcagc
ggtattgtgacacaaaggaatgtagatcccggtacgctggtcagcgcaggaaacagcaag
ccgctgctggtagtagagaacatcagcacgcttcgtttgcgcgttccagttcccgaagca
tacaccgccgccggaacagcctcgcccacgatcgactttaccgtagatgcccggccggat
gttacctatcaggcaaagttgtcccgtaaggcgggtgctattaacctcgccaacagaacg
gagacatgggagtttctttttcagaacgatcagcagcagcttaaatcagggatgtttgcc
aacgccctattaaaactgggcaggcctgcgcccaccttcctcgtaccggcttccgcggtg
gctaccaacctcgagaaacgttttgtcatccgcctgaacggtggtaaagcggaatgggtg
gatgtccgcaacggtatcaatccgggcgataaaatggagatatttggcagcctcaccgca
ggtgataccctgctggtaagggctaccgatgaaattaaaccggggacggcgctggtgcca
aaattccccaaaaagtaa
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integrated database retrieval system
