Chitinophaga oryzae: HF329_10780
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Entry
HF329_10780 CDS
T07451
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
coy
Chitinophaga oryzae
Pathway
coy01501
beta-Lactam resistance
coy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HF329_10780
01503 Cationic antimicrobial peptide (CAMP) resistance
HF329_10780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
coy03036
]
HF329_10780
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_10780
01504 Antimicrobial resistance genes [BR:
coy01504
]
HF329_10780
Chromosome and associated proteins [BR:
coy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HF329_10780
Transporters [BR:
coy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HF329_10780
Antimicrobial resistance genes [BR:
coy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HF329_10780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QJB31777
UniProt:
A0AAE6ZGH5
LinkDB
All DBs
Position
complement(2690938..2692104)
Genome browser
AA seq
388 aa
AA seq
DB search
MRITGNKYHFMKPASKFALIFLSVGVSAMALQSCSSTEAKDDKEHKDSAAAAPALEAFTL
QQGQLSTSIKIPGELVAFQRVDLYAKVSSFVKKLYVDVGSEVKAGQLLVTMEAPELNSQL
SGAESRLKSQEAIYLSSKATYDRLLETSKTPGTVSQNDLDIAYAKQKSDLAQLEAAKASY
REVGDTRNYLEIRAPFSGVISRRNVSAGAYVGPAGKGSDLPIFTLQEQKKLRLVVSIPEA
YNSYLNNNSEVKFTTKSMLNQTFTAKVSRLSGALDERLRSQSIEMDVINDNKQLLPGMVA
EVAIPLSGNHASAFVVPSKAVLNSTQGVYVIKVVNGKALWVPVKTGRKTDEQTEIFGDLA
LNDTLIKVASEEIRDSSAIKHVNVTGAK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcacaggaaataaatatcattttatgaaaccagcatcaaaatttgccctcata
tttttatccgttggtgtgtctgccatggccctgcagagctgtagctccacagaagcgaag
gacgacaaggagcacaaggacagtgcggcggccgcaccggctttggaagcttttaccttg
caacagggacaactgtccacttccataaaaattcccggtgaattggtggcttttcaacgg
gttgacctgtacgcgaaggtgagcagctttgtaaaaaagctgtacgtggacgtgggcagc
gaagtgaaagccggccagctgctggtgaccatggaagcaccggaactgaactcccagttg
tccggcgctgagtcacgcctcaagtcacaggaggctatctatctctccagcaaagctacc
tacgaccgcctgctggaaaccagcaaaacgcccggtaccgtgtcccagaacgacctggac
atcgcttatgccaagcagaagtcagacctcgcacagctggaggctgccaaagcttcctac
cgcgaagtgggagatacccgtaactacctcgagatacgggcgcctttcagcggtgttatc
agccggaggaacgtgagcgccggcgcttatgtaggtccggcgggcaaaggctccgatctg
cctatttttaccctgcaggaacaaaagaaactgcgtctggtggtgagtatcccggaagcg
tacaacagttatctgaacaataacagcgaagtgaaattcactactaagtccatgctcaac
cagacgtttaccgccaaagtaagcaggttgtccggcgcgctcgacgaaaggctgcgttcc
cagagcatcgaaatggacgtgatcaatgataacaaacagctgctgcccggcatggtggct
gaagtggccattccgctctcgggaaatcatgccagcgcttttgtggtgccctccaaagcg
gtgctcaattccacccagggcgtgtacgttattaaggtagtcaacggcaaggctttatgg
gtacccgtaaagaccggccgcaaaacagatgagcagacagaaatcttcggcgatctcgcg
ctgaatgatacccttatcaaagtagccagtgaggaaataagagacagctcggcgatcaaa
cacgtaaacgtgacaggcgctaagtaa
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