Chitinophaga oryzae: HF329_15750
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Entry
HF329_15750 CDS
T07451
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
coy
Chitinophaga oryzae
Pathway
coy01501
beta-Lactam resistance
coy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HF329_15750
01503 Cationic antimicrobial peptide (CAMP) resistance
HF329_15750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
coy03036
]
HF329_15750
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_15750
01504 Antimicrobial resistance genes [BR:
coy01504
]
HF329_15750
Chromosome and associated proteins [BR:
coy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HF329_15750
Transporters [BR:
coy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HF329_15750
Antimicrobial resistance genes [BR:
coy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HF329_15750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Biotin_lipoyl_2
HlyD_D23
HlyD_3
Biotin_lipoyl
HlyD_2
CusB_dom_1
ATPD_C_metazoa
Motif
Other DBs
NCBI-ProteinID:
QJB32693
UniProt:
A0AAE6ZGQ1
LinkDB
All DBs
Position
complement(4140380..4141555)
Genome browser
AA seq
391 aa
AA seq
DB search
MKPKRSVFANLPAGLLYSVVILSLLSGCGASEAHQGGQQAAALPVLKLNAVPATTYREYS
ATLEGRVNVDIRPQVEGILDKIYVDEGAYVKAGQPLFKINDRVYTEAQSNASATLLAAKA
NLEKAQLEVDRLTPLVKNNVVGEVQLKTAQANYQAAKAAVGQAQAQLGSAGINVGYTLIT
APVSGYIGRIPYKVGALVGRAEPQPLTVLSDVNQMYAYFSMSEADFLKFKNETAGNSIAD
KVKQLPQVELKLADNTIYSEKGKIETMEGQFDKTMGAISFRATFPNGAGLLRTGNTGKIR
IPEQFTDAVVIPAEATYELQDKVMVFIVADSNKVTGVPITISGKSGNYYFVEKGVKSGQQ
IVYSGLDRLHDGTVIAPQQMSLDSLLKVKPL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaaaagatccgtttttgcaaacttgccggcaggcttactctatagtgtcgtg
attctttccttgttgtctggctgcggcgcttctgaggcgcaccaggggggacagcaggcg
gcagctttaccggtattgaaactgaatgcagtacctgccactacttaccgcgaatacagc
gcaacgctggaaggccgtgttaatgtggatatccgcccgcaggtggaaggtatacttgat
aagatttatgtagatgaaggcgcttatgtgaaggccggtcagccgttgtttaaaatcaac
gaccgggtgtacacagaagctcaaagcaacgcgagcgccacactgctggccgctaaagcg
aacctggagaaagcgcagctggaagtagaccgtcttaccccgctggtaaaaaacaatgta
gtaggcgaagtacagctgaaaacagcgcaggccaactaccaggcggccaaagctgccgta
gggcaggcgcaggctcaactgggcagcgcaggcatcaacgtaggctatacgctgatcacc
gcgccggtgagcggttatatcggcagaatcccttataaagtgggagcgctggtaggccgt
gcagagccgcagccactgaccgtgctgtctgacgtaaaccagatgtacgcttacttttcc
atgagcgaagccgacttcctgaaatttaaaaacgaaactgccggcaacagcattgctgac
aaagtaaaacagttgccgcaggtagaactgaaactggcagacaataccatctacagtgaa
aaaggaaagatagaaaccatggaaggtcagtttgacaagaccatgggcgctatcagcttc
cgggctaccttcccgaacggtgcaggactgctgcgtaccggcaataccggtaagatccgc
atccctgagcaattcaccgatgccgtggtgatcccggcggaagctacttatgagctgcag
gacaaagtgatggtgtttatcgtagccgacagcaacaaagtgacaggtgttcccattact
atatccggtaaaagcggtaactactattttgtggagaaaggagtgaagtccggtcaacag
atcgtttactccggcctggaccgtctgcacgacggtacggtgattgctccgcaacagatg
tcactcgacagcctgctgaaagtaaaaccgctctaa
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