Chitinophaga oryzae: HF329_18935
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Entry
HF329_18935 CDS
T07451
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
coy
Chitinophaga oryzae
Pathway
coy01501
beta-Lactam resistance
coy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HF329_18935
01503 Cationic antimicrobial peptide (CAMP) resistance
HF329_18935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_18935
01504 Antimicrobial resistance genes [BR:
coy01504
]
HF329_18935
Transporters [BR:
coy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HF329_18935
Antimicrobial resistance genes [BR:
coy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HF329_18935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QJB33276
UniProt:
A0AAE6ZID3
LinkDB
All DBs
Position
4983949..4987089
Genome browser
AA seq
1046 aa
AA seq
DB search
MFEIFIKRPVLSLVISLIITLVGLLALFTLPVTQFPDIVPPSVTVTAKYTGANAEVSAKA
VSTQLERAINGVPGMTYMSSVSSNDGITVIQIFFQVGIDPDQAAVNVQNRVATVIDELPE
EVIKAGVTTEKEVNSMLLYLNVMSEDTSLDEQFIYNFADINVLQELKRIDGVGRAEIMGA
KEYAMRVWLKPDRMLAYNVSSDEVIDAIRKQNIEAAPGKTGESSDKNPLLLQYVLRYTGK
FFEPEQYKQIVLRAGADGSVLHLKDIADVEFGSLTYSMVSKTDGNPSASIMLKQRPGSNA
RDVINNVKKKMEEMKNTSFPPGMTYNFNYDVSRFLDASIHEVVRTLFEAFLLVFVVVFIF
LQDFRSTLIPALAVPVALIGTLAFMQMMGFSINLLTLFALVLAIGIVVDNAIVVVEAVHV
KMSEDHLPPMEATIAAMREISGALVAITLVMSAVFIPVAFLSGPVGVFYRQFSLTLAISI
VISGINAVTLTPALCAIMLKDTHGKPRKKNLLQRFFNGFNKGYTATENKYARLVSFIAGR
KIITLIALAGFFVATWGASAILPSGFIPTEDQGMIYVNVTAPPGATVERTEEVLDQIQAI
AAQLDEVESVSTLAGYSLVNEVAGASYGMGMVNLKPWDDRKATVSDIIAKLQKLSAGIAD
ASIEFFPPPTVPGFGNASGFELRLLDRSGSGDLRQTAQITNNFIDALKKRPEIGAAFTSF
DAEFPQYLIHVDQGMAAKKGVSIENAMKNLQTLMGSYYASNFIRFGQMYKVMVQADPAYR
SKPEDLLKLHVKNDRGEMVSYADFVKLERVYGPEQLTRYNMYTAAMINGDAAPGYSSSQA
IEAVQEVAAKELPRGFSYEWSGMTREQILSGNQAIYIFAIVLVFVYLLLAAQYESFLLPL
PVLLSLPAGIFGAFISLKLVGLENNIYAQVALVMLVGLLGKNAILIVEFAILRNKHGASV
LEAAKEGAVSRLRPILMTSFAFIAGLIPLCIASGAGAMGNRSIGTAAAGGMLIGTLFGVI
VIPGLYVLFASMIPKKNVELKAYTNE
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaatatttattaaaagaccggtgttatcactggtcatatcgcttattatcacg
ctggtaggcctgctggcgcttttcacgctgccggtcacccagttcccggatatcgtaccg
ccctccgtgaccgtgacggccaaatataccggcgccaacgccgaagtatccgccaaagcg
gtgtccacacagctggaacgcgctatcaacggggttcccggcatgacctacatgtcgtcc
gtgtccagtaacgacggtattaccgttatccagatatttttccaggtaggcatagacccc
gaccaggctgctgtaaacgtacagaacagggtggccaccgtgatcgacgaattacccgaa
gaggtgatcaaagccggtgttaccacagagaaggaagtgaacagtatgctgctgtacctc
aacgtcatgagtgaagacacctcgctggacgagcagttcatctacaacttcgctgatatt
aacgtattgcaggaactgaaacgtattgacggtgtaggccgcgccgaaatcatgggcgcc
aaggaatacgccatgcgcgtatggctcaagccggaccgcatgctggcctacaacgtatct
tccgatgaagtcatcgacgctatccgcaaacagaacatcgaagccgcccccggtaaaacc
ggcgaaagctccgataaaaaccccctgttgctgcaatatgtgctccgctataccggtaag
ttctttgaaccggaacaatacaagcagatcgtcctgagagccggcgccgacggatcggtg
ctccacctcaaagacattgctgacgtggaattcggctccctcacctacagcatggtgtct
aaaactgatggcaacccctccgcctccatcatgcttaaacaaaggcccggttcaaacgcc
cgcgacgttatcaacaacgtgaagaaaaagatggaagagatgaaaaacacctctttccct
ccgggcatgacctacaacttcaactacgacgtgtcccgcttcctcgacgcctccatccat
gaggtggtgcgcaccctctttgaagcgttcctgctcgtattcgtggtggtgtttatcttc
ctgcaggacttccgctctaccctcatccccgcgctggcggtaccggtagccctcatcggt
acgctcgccttcatgcagatgatgggcttctccatcaacctgctcaccctcttcgcgctg
gtactggccatcggtatcgtagtggacaacgccattgtggtggtggaggcggtgcacgtg
aaaatgagtgaagaccacctcccgcccatggaagccaccatcgccgcgatgagagagatc
agcggcgcgctcgtggccatcacgctggtaatgtctgccgtgtttatcccggtagcattc
ctctccggccctgtgggcgtgttctaccggcagttctccctcaccctcgccatctccatc
gtcatatccggtatcaacgcggtaacgttaacacctgcactctgcgctatcatgctcaaa
gacacgcacggcaaaccgcgtaaaaagaacctgctgcagcgtttcttcaacgggttcaac
aaaggctataccgctacggaaaataaatacgccaggctggtcagcttcatcgccggccgc
aaaattattaccctgattgccctcgcaggcttctttgtggctacctggggcgccagcgcc
atcctgccttccggcttcatccccacagaagaccagggcatgatctacgtcaacgtgaca
gctcctccgggcgctaccgtggaacgtacggaagaagtgctggaccagatacaggccatc
gccgcccagctggatgaagtggagtccgtatccaccctggccggctacagccttgtaaac
gaagtggcaggcgcctcttacggcatgggcatggtaaaccttaaaccatgggacgatcgt
aaagccaccgtaagcgacatcatcgccaaactgcagaaactctccgccggcatcgcagac
gccagcatcgagttcttcccgccgcctaccgtgcccggtttcggtaacgccagcggtttc
gaactgcgcctgctggaccgcagcggcagcggcgacctgcgacagacggcacaaatcacc
aataacttcatcgacgccctgaagaaacgccccgaaataggcgccgccttcaccagcttc
gacgccgagttcccgcaatacctcatccacgtggaccagggcatggccgccaaaaaaggc
gtcagcatcgaaaatgccatgaaaaacctgcagacgctgatgggtagctactacgcctcc
aacttcatccgcttcggacagatgtataaagtgatggtacaggccgaccctgcctacaga
agcaaaccggaagacctgctgaaactgcatgttaaaaacgaccggggcgagatggtgtcc
tacgcggacttcgtaaaactggaacgcgtatacggaccggaacagcttacccgctacaac
atgtacaccgccgcgatgatcaacggtgacgctgcgccaggctacagcagcagccaggcg
attgaagcggtacaggaagtggccgccaaagaactgcccaggggcttcagctacgaatgg
agcggcatgacccgggaacagatcctttccggcaaccaggccatctacatttttgccatc
gtactggtattcgtatacctgctgctggcagcgcagtacgaaagcttcctgcttccgctg
ccggtactgctgtccctacctgcaggcatcttcggagctttcatctccctgaaactggta
ggactggaaaacaacatctatgcacaggtggcactggtaatgctcgtggggctgctcggt
aaaaacgccatcctcatcgtggaattcgccatcctgcgtaataaacatggcgcttccgtg
ctcgaagccgccaaagaaggcgcggtgtccaggctaaggcccattctgatgacatccttt
gccttcatcgccggtctgatcccgttgtgtatcgcttcaggtgcgggcgctatgggcaac
aggtccattggtaccgctgctgccggcggcatgctgataggcaccctcttcggtgtaatc
gtcatccccggcctctatgtgctgtttgcctctatgattccgaaaaagaatgttgaactg
aaagcttacaccaatgaataa
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