Chitinophaga oryzae: HF329_29925
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Entry
HF329_29925 CDS
T07451
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
coy
Chitinophaga oryzae
Pathway
coy00300
Lysine biosynthesis
coy00550
Peptidoglycan biosynthesis
coy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HF329_29925
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HF329_29925
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
coy01011
]
HF329_29925
Enzymes [BR:
coy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HF329_29925
Peptidoglycan biosynthesis and degradation proteins [BR:
coy01011
]
Precursor biosynthesis
Amino acid ligase
HF329_29925
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF72
CbiA
Motif
Other DBs
NCBI-ProteinID:
QJB35296
UniProt:
A0AAE7D9W5
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All DBs
Position
complement(7633634..7635100)
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AA seq
488 aa
AA seq
DB search
MKTLRDILYNVGIRAVHGNTDIPVNAPAIDSRSVGPGDAFIAVRGVHTDGHQYIDKAIAQ
GAAAIICETLPEVLLDTVTYVQADNSATASGIMAGNFYDNPSHKLQLVGVTGTNGKTTIA
TILFRLFSRLGYHCGLLSTVQNQIGDTVIPSTHTTPDSISLNALLARMVEEGCLYAFMEV
SSHAIHQQRIAGLKFAGGIFSNITHDHLDYHKTFDEYIRVKKSFFDSLPASAFALTNLDD
KRGMVMLQNTKARKATYSLRTLADFKGKILENNLTGLIMQVGDTEVHFRLIGEFNAYNLL
AVYGAAVLLGQDKAAVLRTLSNTQGAEGRFEYIVSAHDQIIAIVDYAHTPDALKNVLATI
KNLRKGHEQVITVVGCGGDRDTAKRPVMAAVAADSSDRVILTSDNPRSEDPDAIIREMEA
GVPVHQKKRVISITDRREAIKTAVTLAGKEDIILVAGKGHEKYQEIKGVKHPFDDKQVLD
EVMRLLDK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctgcgcgacatattatacaatgtaggcatcagggccgtacacggaaatacc
gacatccccgtgaacgcacccgccattgattccaggtccgtcgggcccggcgacgccttc
attgccgtgagaggagtacacaccgatggccatcagtatatcgataaagccatcgctcaa
ggcgccgctgccatcatctgcgaaaccctgccggaagtgctgctcgacacggtgacctac
gtacaggcagacaacagcgccacggcaagcggtatcatggcaggcaacttctatgataac
ccttcccacaaactgcagctggtaggcgttaccggcaccaacggtaaaaccaccatcgct
accatcctgttccgtttgttctcccggctgggctaccactgcggactgctgtccactgtg
caaaaccagatcggcgataccgtcataccttctacccataccaccccggactccatcagc
ctcaacgcgctgctggcacggatggtggaagaaggatgcctgtacgccttcatggaagta
agctcccacgccatccaccagcaacggatcgcaggactgaaattcgccggaggcatcttc
agcaatatcacccatgatcacctggattatcacaaaacatttgatgaatacatccgggtc
aaaaaatcgttctttgacagcctgcccgcttcggctttcgcccttaccaatctcgacgat
aaaagaggtatggtaatgctgcaaaacaccaaagcccgcaaggccacctatagcctgcgt
acactggccgatttcaaaggaaaaatcctggaaaacaacctcaccgggctgatcatgcag
gtaggcgacacagaagtgcacttccgcctgatcggtgagttcaacgcctacaacctgctg
gcggtatacggcgctgccgtgttgctcggacaggacaaagccgcggtgctgcgcaccctc
agcaatacgcagggtgctgaaggccgcttcgaatatatcgtgtccgcacacgaccagatc
atcgctatcgtggactacgcccacacccccgatgccctgaaaaacgtgctcgctaccatc
aaaaacctgcgcaaaggacatgaacaggtcatcacagtggtaggctgcggcggcgaccgc
gacaccgcgaaaagaccggtcatggcggcagtagcggccgacagcagcgaccgcgtgatc
ctcacttccgataatccccgctccgaagatccggacgcgattatccgcgaaatggaagcc
ggcgtgcccgtgcaccagaaaaaaagagtgatctccattaccgaccgcagggaagcgatt
aaaaccgccgttaccctcgccggaaaagaagacatcatcctcgtggccggaaaaggacac
gagaaataccaggaaatcaaaggggtgaaacatcccttcgacgataaacaagtgctggat
gaagtaatgaggctgctcgataaataa
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