Clostridium pasteurianum DSM 525 = ATCC 6013: CPAST_c13280
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Entry
CPAST_c13280 CDS
T03811
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cpae
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPAST_c13280 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpae03400
]
CPAST_c13280 (nth)
Enzymes [BR:
cpae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CPAST_c13280 (nth)
DNA repair and recombination proteins [BR:
cpae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPAST_c13280 (nth)
Prokaryotic type
CPAST_c13280 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Lpg0393_VPS9
Preseq_ALAS
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AJA47427
UniProt:
A0A0H3J3M1
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All DBs
Position
1428568..1429206
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AA seq
212 aa
AA seq
DB search
MNKKDIDNTLKILSKVYNEAKCALNFNSAYELLIATILSAQCTDVRVNIVTEKLFSKYNT
PEKMVELTDTELQEIIKPCGFYKNKSKNILATSRELLFNYNSQVPKTMEELTKLPGVGRK
TANVVMSNAFNIPAIAVDTHVFRVSKRIGFASGDNPLEVEQELRKVIPKNMWSNAHHYLI
WHGRKICKARKPQCEICPISEYCNYYKENFKL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaaaaagatattgataatactcttaaaattttaagtaaagtttataatgaagca
aaatgtgcactaaattttaatagtgcttatgaactgctaattgctacaattttatcagct
caatgtacagatgtaagagttaatatagtaactgaaaaattatttagtaaatataatact
ccagaaaaaatggtggaattaacagatacagaacttcaagaaataattaaaccctgtgga
ttctataaaaataaaagtaagaatattttagctacatcaagggaattattatttaattat
aatagtcaggttccaaagactatggaagagcttactaaattacccggggttggaagaaaa
actgccaatgtagtaatgtcaaatgcctttaatatacctgctatagcagtagatactcat
gtcttcagggtatctaaaagaataggatttgcatcaggagataatcctcttgaagtagaa
caagaacttagaaaggttattcctaaaaatatgtggagtaatgctcatcattatttaata
tggcatggaagaaaaatatgtaaagctagaaagccacaatgtgaaatttgtcctataagt
gaatattgcaattattataaggaaaactttaagttgtaa
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