Caminibacter pacificus: C6V80_07865
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Entry
C6V80_07865 CDS
T06023
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cpaf
Caminibacter pacificus
Pathway
cpaf01501
beta-Lactam resistance
cpaf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C6V80_07865
01503 Cationic antimicrobial peptide (CAMP) resistance
C6V80_07865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpaf03036
]
C6V80_07865
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpaf02000
]
C6V80_07865
01504 Antimicrobial resistance genes [BR:
cpaf01504
]
C6V80_07865
Chromosome and associated proteins [BR:
cpaf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C6V80_07865
Transporters [BR:
cpaf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C6V80_07865
Antimicrobial resistance genes [BR:
cpaf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C6V80_07865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
HlyD_2
CusB_dom_1
NQRA_N
PTS_EIIA_1
OEP
Motif
Other DBs
NCBI-ProteinID:
QCI28886
LinkDB
All DBs
Position
complement(1477112..1478155)
Genome browser
AA seq
347 aa
AA seq
DB search
MKKILALALSVGALFAFEYATAKKETINITRDYVANVYSPKQVMVATRLMGYIKSMPVEE
GDVVKKGQLLFEVDPADIYSMLNQARGAVLQAKSGVLMAEMAYADALKDYERFKNLYKNG
AVSKRDFEKMTLMKNIRKKQVDMAKGMLKQAEAGLARAEAQLKYAKVTSPIDGVVTMKMK
KVAEMALPGYPVVVLSDIHVLKAKSTVKESDIDKFKIGMPVNIYVPALKKSFPAEVSTII
PAGDNMTHSFVIKYTFENHQGLLPGMYAKAKIVVGKKEAVVVPFSALTTRAGIVGVFVND
NGVARFVPVKQVGQVGDNIAVTGLVGGEEVILYPPANLEDGQKIEEQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatattagctttagcgttaagtgttggggcgctttttgcgtttgagtatgcc
actgcaaaaaaagagactatcaatatcacaagagattacgttgcaaatgtatattctcca
aagcaagtaatggtagctactagacttatggggtatattaaatctatgcccgttgaagag
ggtgatgttgtaaaaaaaggacaactgctttttgaggttgaccctgcagatatctattcg
atgctaaatcaagcaagaggtgccgttttacaagctaaaagcggtgttttaatggccgaa
atggcatatgccgatgcattgaaagattatgaaagattcaaaaatctatataaaaacgga
gcagttagtaaaagagatttcgagaaaatgactttaatgaaaaatatcagaaaaaaacaa
gtcgatatggctaaaggaatgttaaaacaagcagaagccggacttgcaagagccgaagct
caacttaaatatgcaaaagtaacttctccgattgacggtgtggttacgatgaaaatgaaa
aaagtagccgaaatggcactacctgggtatccggtggtagttcttagcgatattcacgta
ttaaaagcgaaaagtacggtaaaagagagcgatatcgataaatttaaaatcggtatgcct
gtaaatatttacgtacctgcacttaaaaaatctttccctgctgaagtttcgactattatt
ccggcaggtgataatatgactcattctttcgttattaaatatacttttgaaaatcatcaa
ggacttttacctggtatgtatgcaaaagcaaaaatcgtagtcggtaaaaaagaagctgta
gtcgtaccgttttcagcacttactacaagagccggaattgtcggtgtttttgtaaacgat
aacggagttgcgagattcgtacctgtaaaacaagtaggacaagttggagataatattgct
gttaccggcttagtcggtggagaggaagttattttatatccgcctgcaaaccttgaagac
ggacaaaaaatagaggagcaataa
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