Cellulomonas palmilytica: F1D97_00980
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Entry
F1D97_00980 CDS
T08423
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cpal
Cellulomonas palmilytica
Pathway
cpal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F1D97_00980 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpal03400
]
F1D97_00980 (nth)
Enzymes [BR:
cpal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
F1D97_00980 (nth)
DNA repair and recombination proteins [BR:
cpal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F1D97_00980 (nth)
Prokaryotic type
F1D97_00980 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
PT
Motif
Other DBs
NCBI-ProteinID:
UJP40161
LinkDB
All DBs
Position
complement(191835..192599)
Genome browser
AA seq
254 aa
AA seq
DB search
MTTSAAGPELPTSLPTSLPTDLPTDLPTESPLARTRRARRADRLLAERYPDARCELDFTD
AFTLLVATVLSAQTTDVRVNATTPELFARYPGPAELAAADPDELEAILKPLGFFRAKAKA
VTGLSRALVEQFGGTVPRRLDKLVTLPGVGRKTANVVLGNAYGVPGITTDTHVLRLSRRL
GYTASEDPLVVERELGALLPRRDWTMACHRLIFHGRRTCHARRPACGACPLVRLCPSAGI
GETDPVKAQALLKG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgagcgccgcggggcccgagctcccgaccagcctcccgaccagcctcccgacc
gacctcccgaccgacctcccgaccgagtcccccctcgcccgcacccgccgcgcgcggcgt
gccgaccggctcctcgcggagcggtacccggacgcacggtgcgagctcgacttcacggac
gcgttcacgctcctcgtcgcgaccgtcctgtccgcgcagaccacggacgtgcgcgtgaac
gcgaccacgcccgagctgttcgcgcggtaccccggcccggcggagctcgcggccgcggac
ccggacgagctcgaggcgatcctcaagccgctcgggttcttccgcgcgaaggcgaaggcc
gtcacaggcctgtcgcgcgcgctcgtcgagcagttcggcgggacggtgccgcgccggctc
gacaagctggtgactctcccgggcgtgggccgcaagaccgcgaacgtcgtgctgggcaac
gcgtacggcgtccccggcatcaccacggacacgcacgtgctgcggctgtcccggcggttg
gggtacaccgcgagcgaggacccgctggtcgtcgagcgtgagctcggtgcgctgctgccg
cggcgcgactggaccatggcgtgccaccggctgatcttccacgggcgtcgcacgtgccac
gcgcggcggccggcgtgcggggcgtgcccgctggtgcggctgtgcccgtcggcgggcatc
ggcgagaccgacccggtgaaggctcaggcgttgctcaagggctga
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integrated database retrieval system
