Carica papaya (papaya): 110810202
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Entry
110810202 CDS
T05151
Name
(RefSeq) nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110810202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110810202
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110810202
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Big_2
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_3rd
SH3_Tf2-1
Ig_NUP210_1st
Ig_NUP210_5th
Ig_NUP210_16th
Ig_NUP210_9th
p12I
Motif
Other DBs
NCBI-GeneID:
110810202
NCBI-ProteinID:
XP_021891982
LinkDB
All DBs
Position
Unknown
AA seq
1369 aa
AA seq
DB search
MSSHCSTSARLRSVAPYSGRKETAVYATDVRTGVVIRCKVFIDNFSRIQIFHNSIKLDLD
GLATLRVRAFDSEENEFSSLVGLQFMWQLMPETDELSHHLAHVPLKDSPLSDCGGLCGYL
DIRIKLEDSGLFSDLYVVKGIGIGHEKVLVRLLEPLLTHMSDKIALTVVEAMSLAPLSPL
FVLIGAGLRYTLKVIRGNTPQVVYLPSPHHRWSVSNSSVAEVNSLNGFTHALNLGVTNVI
VEDTRVSGHIQMSSLNVVLPDSLVLYLSHLSSISDDSLEGTKDISSGARWYIVSGREYII
QMKVFSREPDAQEIYITESDDIKLYDQQSDNWKTSLVTEQIAQKYGSLNTRILKSTSPGL
GKLTASLTYFSGHLNSKEVTIEVSTLFSMIMLQNFPVETAVGSYLEAAVTLKAPNGAYFS
RCDAFSLLVKWKAGSESFVLVNATREMSALDYLQNIEFPKSASGPPCSWTHIYAAGSGRT
MLHATLSKEYSHFDSYFSQHVVLKATSIIAAYPPLVLRQAGDGSPFGGYWYDRAQAETDN
ELKRLDKLYLCTVHATVTGFCGTMNIPVYAALPKGSENVLTDTVRLQLVSTLGVNPEFNL
LVFNPEAKVNLSITGGSCFLESVVNDSRVVEIIQSPPGLHCLQLVLSPKGLGTALVTVYD
IGLVPPLAASAEVQVSNVDWIKILSGDEITIMEGRTESIDIVAGIKDGSTFVSSQYPYMN
VCVHIEDDIIELVDPDHSSTPARGYLRAPTFKIVGKHLGVTSLHVSVKQQSGNEILSQPI
KVEIYAPPRLHPNHIFLVPGASYALIMEGGPTIGVSVEYAITDDGIATVHKSSGQLSAIS
PGNTTILATIFGKRDAVICQAYGSVQVGVPTSASLIAQSDMLAIGREMPVFPSFYEDDLF
SISELCKSYKWAIEDEKVLNFLVLEDLHDRELGFISVLHGRSAGRTNVTVSFLCEFTSSG
SYFESRSYHASMPLLVVPDLPLALGVPITWVLPPFYTTSGVLPSSLETHVETDGQIRKRA
ISYSVLRNCDEVIRDPISIDGNRIKTKESNNIACIQAKDRASGRVDIASCVRVSEVTQIR
ITSQEFPFRTIDIAVGAELELPISYCDSLGNPFYEAHDVVHYNAQTNHPDVVSISTSHDG
NENIRLKGMQHGKALLRVSINNNLRKADYMMVSVGARVYPRSPVVHIGSRLNFSIEGLDG
QVSGHWLSANKSVITVETDSGQSEAVGEGSTQVFFQSNSMKLWTKVKVLSGNIVRVDAPK
EMLTNVPPPVKGYNFLVKFSDGKSEAPRNGKAVTYNCQVNPSYVGYAKPWMDDMGNTYCP
RSFLTHQKFGKKGKLSPRFIGPFEILEKYELLPLEKDLTYEEEPIHVLE
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcactgttcaacaagtgcacggctgagatcagttgccccttacagtggtcga
aaggagactgcagtttatgctactgatgttcggactggggttgtaattcgctgcaaagtt
ttcattgataatttttccaggatccagatattccacaattctattaagcttgatctagat
gggcttgctactcttcgagtccgtgcctttgatagtgaagaaaatgagttttcatcattg
gtgggtctgcagttcatgtggcagctgatgcctgaaactgatgaattgtctcatcacctt
gcgcatgttcccttgaaggattcccccctcagtgactgtggtgggctctgtggttactta
gatatccgaataaagcttgaagatagtggtttattttcagatttatatgttgtaaaagga
attggaattggccatgagaaagtcttagttcgtttgctggagccactacttacacatatg
tctgataaaattgctctaactgtagtggaagccatgtcacttgctcctctttcacctctt
tttgtcctcattggcgctggtctccgttatactcttaaagttattcgtgggaatactcct
caagtggtttatctaccgtcgccacatcatcgatggtcagtttcaaactcatcagttgct
gaagtgaacagtttgaatggtttcactcatgcgttgaacttaggggtaacaaatgtcatt
gttgaagatactagggtttctgggcacattcaaatgtcatcgctcaacgtggttttacca
gattctttggttctgtatctatcacatttatcatctatatctgatgattctctagaaggt
actaaagacatttcatctggggcacgttggtatattgtctctggtcgggaatacatcatt
caaatgaaagttttctctcgggaacctgatgcacaagaaatatacatcacagagagtgat
gatatcaagttgtatgaccagcagtctgataattggaagacttccttggtgacagagcaa
attgcacaaaaatatggctcactgaatactcgaattctaaaatcaacttcgccaggattg
ggaaaattgacagcttctttaacttattttagcgggcatcttaattcaaaggaggtgact
attgaagtttctactctgttttctatgattatgttgcaaaatttccctgtagagactgct
gttggatcatatttggaagctgctgtcacactgaaagctccaaacggtgcatatttttct
cggtgtgatgcttttagcttgttggtaaaatggaaggctggaagtgaatcttttgttctt
gtaaatgctacgagagagatgtctgctttggactatctacaaaacattgaattcccaaaa
tcagcttctggtcctccatgctcatggactcacatatatgcagctggttctggccgaacc
atgcttcatgccacactatcaaaagaatatagtcattttgattcctattttagtcaacat
gttgtcttgaaagcaacttcaattattgcagcatatcctccacttgttctccgtcaagca
ggtgatggaagcccttttggtggttattggtatgatagagctcaagcagaaacagacaat
gaactaaaacgcttggataagttatacctttgtactgtccatgccactgttactggtttc
tgtggtaccatgaacattccggtttatgctgcattgcctaaaggatcagaaaatgttctt
acggatactgtgcgtttacagctggtttctactctaggagtcaacccagagttcaacttg
ttggtcttcaatcctgaagctaaggtgaatttgtcaattactggagggagctgtttcttg
gaatctgttgtgaatgattctcgagttgtagaaattattcagtctccacctggtttacat
tgcttacaactggtactgtctcctaaaggactgggaactgctctcgtgactgtttatgat
attgggcttgttcctccacttgcagcttctgctgaggttcaagtgtcaaacgtggactgg
ataaagattctatcaggagatgagataaccattatggaaggacgtacagaatctattgat
atcgtggctgggattaaggatgggagtacctttgtgtcttctcaatatccatatatgaat
gtttgtgtgcatattgaggatgatataatagaacttgttgaccctgatcattcttcaact
cctgctcgaggatatctcagggcacccacttttaaaattgttggtaaacatctgggagtc
acatctcttcatgtcagtgttaaacagcaatcaggaaatgaaatattgagccaaccaata
aaggtagaaatttatgcccctccaagacttcatcccaaccatatttttctggtgcctggt
gcatcttatgcgcttattatggaaggagggcctacaattggtgtatctgttgagtatgcc
atcacagatgatggaattgcaacagtccacaaatcttcaggacagctttctgcaatttct
cctgggaacacgaccatccttgcaacaatttttgggaaaagagatgctgttatatgtcaa
gcatatggcagtgttcaagtaggagtaccgacttcagcaagtttgattgcacaaagtgac
atgcttgccattggccgtgagatgccagtatttccttcattttatgaggatgatttattt
tctatttctgagctctgcaaaagttacaagtgggctatagaagatgaaaaggtgttgaat
ttccttgtattagaggatttacatgacagggaacttggtttcatcagtgtcttgcatgga
agatcagcaggcaggacaaatgtcacagtctcattcttgtgtgaatttacttcttctggt
tcatactttgaatcaagatcttaccatgcttcaatgccattattggtggtgcctgatctc
cctctggctctgggagttccaattacctgggttcttcctcctttctatactacatctggt
gttttgccttcatctttagaaacacatgtcgaaacggatggtcagattcgcaaaagagcc
attagttattctgtactgagaaactgtgatgaagtcatacgggatcctatttccattgat
ggaaacagaataaaaacaaaagagagtaacaatattgcatgcattcaggcaaaagatcgg
gcaagtggtagagtcgatattgcttcttgtgtcagggtttctgaggtgacccaaattagg
ataacaagccaggaatttccattccgaacaattgatattgctgtcggtgctgaacttgaa
cttccaataagctattgtgattctttaggaaatcctttttatgaagcacatgatgttgtt
cactacaacgctcaaactaaccaccctgatgttgtatctattagcaccagtcatgatggc
aatgaaaatatccgtctcaagggaatgcaacatggtaaagctcttcttcgagtgtcaata
aacaataatctacggaaggcagactatatgatggtttcagttggtgcgcgtgtatatcct
cgaagtccagttgttcatattggaagtcgtcttaacttcagcatagaaggtttggatggt
caggtttcaggccattggcttagtgccaacaaaagtgtcataactgtagagacggattct
ggacaatctgaagcagtgggggaaggttcaacacaagttttctttcaaagtaatagcatg
aaactgtggaccaaggttaaagtgttatcaggaaacattgttcgtgtagatgctccaaaa
gagatgctgacaaatgtccctccgcctgtcaaaggatataacttcttggtgaagttcagt
gatgggaaatctgaagctcccagaaatggcaaagcagtcacgtacaactgccaagtgaac
ccttcatatgttggctatgcaaagccatggatggatgacatgggcaacacttattgccct
cgttctttccttactcaccagaagtttggaaagaaaggaaagttgagtccacgtttcata
gggcctttcgagattctcgagaagtatgagttattaccattagagaaggatttgacttat
gaagaagaaccgatccatgtccttgaatga
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