KEGG   Carica papaya (papaya): 110811532
Entry
110811532         CDS       T05151                                 
Name
(RefSeq) DNA repair protein RAD16-like
  KO
K15083  DNA repair protein RAD16
Organism
cpap  Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110811532
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      110811532
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_2 Prok-RING_4 zf-C3HC4_4 F26C11_3_mid ResIII zf-Di19 TPR_NUP160_120_M zf-Nse
Other DBs
NCBI-GeneID: 110811532
NCBI-ProteinID: XP_021893748
LinkDB
Position
Unknown
AA seq 780 aa
MELRPRKRIAKPPIEGSVEERSDSSDDYVLPSESDSSISSDEDETYGERQVTVVNRKGKA
KTNDNDRSGSALIPIASTAGPSEINVEEGELNDQQQTCPEISIRDVRSPSPRSSRDLLEL
QGTLVICPVVAVTQWVSEIERFTSRGSTKVLVYHGANRGKSSRQFTDYDFVITTYSIVEN
EYRKYMMPPKDRCPYCGNQYQRKRLSFHLRYFCGPTAIRTLNQSKQMKKKVKVSSTWSKQ
DAESGKGNANGYEVNKGKKTGKKTSEQLEEEKEALVELGNSADDESSLSRGKSVLHSMKW
NRIILDEAHSIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSLIRFLRITPYSYY
FCKDCDCRILDYSSSTACSNCPHNCVRHFCWWNKYVATPIQLYGNLDTGRRAMTLLKEKI
LKNVVLRRTKKGRAADLALPPRIISLRQDTLDIKEADYYESLYNESQTQFNTYVEAGTVM
NNYAHIFDLLTRLRQAVDHPYLVEYSSSAAVKSGNTVDISNGEQVCGICHDQAEDPVVTS
CAHVFCKACLIDFSAALGQVSCPSCSKLLTVDLTTKMDVGDQTMKTTIKGFKRSSILNRI
RLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGS
MSIPARDAAIKRFTEDPDCKIFLMSLKAGGIALNLTVASHVFLMDPWWNPAVEQQAQDRI
HRIGQYKPIRVVRFVIENTVEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFIT
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggagctccgtcctcgaaaaagaatcgccaaacccccgattgaaggctctgtggaagag
cgcagtgatagttctgatgattatgtgctgccttcggaatctgattctagcatctctagc
gatgaagatgaaacatatggagagagacaggttacggttgtaaatcgcaagggaaaggct
aagactaatgacaatgatcggtcaggttctgctcttattcctattgccagtactgctgga
ccttcagaaataaatgttgaggaaggggagctgaatgatcaacaacaaacctgcccggaa
atctctatacgtgatgtacgctctccatcaccaagatcatcaagagatttgctagaactc
caaggtacccttgttatttgtcctgtcgttgccgtgactcaatgggttagcgaaattgaa
cggtttacttccagggggagcactaaggtgcttgtttatcatggggcaaatagagggaag
agttctagacagttcacagattatgattttgtaatcacaacttattcaatcgttgagaat
gaatataggaaatatatgatgccacccaaggacagatgcccatactgtggaaatcaatat
cagcgaaaaaggctttcattccatctgagatatttttgtgggcctactgctattagaaca
ctgaaccagtctaagcaaatgaagaaaaaggtgaaagtttcatcaacatggtcaaagcag
gatgcagaatctggcaaagggaatgctaatgggtatgaagttaataagggaaaaaaaact
gggaaaaagacatcagagcaacttgaagaagaaaaagaagctctggttgaattgggaaat
tcagcagacgatgaatcgagcttgtctagggggaagtctgttctgcactctatgaaatgg
aaccgtatcatcctggatgaggctcattccataaaagacagacgtagcaacactgctagg
gctgttcttgctttagaatcttcctataaatgggctctgagtggcactccccttcagaat
cgtgttggcgaactttactctctgatccgtttcctgcgaataactccatactcatattac
ttttgtaaggattgtgactgcaggattcttgattacagttcatcaactgcatgctcaaac
tgtcctcataattgtgtaagacacttctgttggtggaataagtatgtggcaacaccaata
caactatatgggaatcttgatactgggcgaagggctatgacattgcttaaagaaaaaatt
ttgaagaatgtagttttgagacgcacaaaaaagggcagggctgctgatcttgcacttcct
cctagaattatttcactgaggcaggatactttggatatcaaagaagcagattattatgaa
tcattgtacaacgagagtcagacacagtttaatacgtatgttgaggcaggaactgtaatg
aataattatgctcacatttttgatctccttacccgcttgcgccaggcagttgatcatcct
taccttgtggagtattctagtagtgctgcagtcaaaagtggcaacactgttgatattagc
aatggtgaacaagtatgtggcatttgccatgatcaagcagaagatcctgttgttacttct
tgtgcacatgtcttctgtaaagcttgcttgattgatttctctgctgccctcggacaagta
tcatgcccatcttgctcaaaattacttaccgtggatttgacaacaaagatggatgttgga
gatcagacaatgaaaacaaccattaaggggtttaagcgctcaagtattctgaatagaatc
cgattaaatgatttccagacgagcacaaaaattgaggctttgcgggaggaaatcagattt
atggttgaaagagatggttcagctaaaggaattgttttcagccagtttacatcattcttg
gatctcataaattattctctccataagtctggcataaattgtgttcagttggtgggcagc
atgtccatacctgcaagagatgctgctatcaagaggtttactgaggatccagactgcaag
attttcctcatgagtttgaaagctggaggcattgccctcaatctcacagttgcatcgcat
gttttcttgatggacccctggtggaacccagctgttgagcagcaagcacaagatagaatc
caccgaatagggcagtacaaaccaatcagggttgtgaggtttgtcattgagaatactgtc
gaagagaggattttgaagctacaagaaaagaaggaattagtatttgaagggactgtcggt
ggctccacggaggctttgggaaaattgactgaggcagacatgagatttcttttcatcact
tga

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