KEGG   Carica papaya (papaya): 110811937
Entry
110811937         CDS       T05151                                 
Name
(RefSeq) LOW QUALITY PROTEIN: switch 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
cpap  Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110811937
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    110811937
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C
Other DBs
NCBI-GeneID: 110811937
NCBI-ProteinID: XP_021894259
LinkDB
Position
Unknown
AA seq 709 aa
MSLFHTFKETLKPCTNLSSSSSTQPSSHSQELNSRVSPRKPPKSSLSLQLQRLEDAYFPL
PQTRQIRSTYAGNAYVKHGEDKEEEEEEEEEVNEGEVGVLEFGRPKLSQFQFDTTGPFEP
LVLSSDGEIPVVQVPASINCRLLEHQREGVKFLYNLYKNNQGGILGDDMGLGKTIQSIAF
LSAVYGKDGETSDSKILKGNQVGKKSPVLIVCPTSVIHNWESEFSTWANFSVSVYHGANR
DLILEKLEGSAVEVLITSFDSFRXXXXXFDWVSLGXLGTREHFREXYDEPLKHGQRSTXP
ERFVRVADERKQHLXAVLRKHMLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYRRMLQ
LPDIQCLINKDLPCSCGSPLKQVECCKRIVPDGIIWRYLHKDNPDGCDSCPFCLVLPCLA
KLQQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAHDLQAQDRSFRFGQKRHVVVFRLLA
AGSLEELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDCKEFQGELFGICNLFRDISDKLF
TSNIIELHDKQGRFVHDQNVKHETTELGAYTSSKDGVTGSKTKQPSDLEETTSQKLALEE
FGILYAHRNEDVVNYGPGLQGMIKASVPQDDNSGQTIIPVVKKRKQSDVNGKENISSSKD
QKKIQYNLISQFVGMEVIEFSKWVLAATPSEREKVLRDYKKRKEKRPNG
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgtcattgttccataccttcaaagagactctaaagccctgcaccaatctatcctcatca
tcctcaacccagccttcttcacactcccaggaattgaattcaagagtaagccctagaaaa
cccccaaaatcatctctttccttgcagcttcaacgtcttgaagatgcttatttccctctg
ccccagacgcgccaaattcgaagtacttatgctggaaacgcttatgttaaacatggtgaa
gacaaagaagaagaagaagaagaagaagaagaagtcaacgaaggagaagtaggggtactt
gaatttggaagacccaaattgagtcagtttcagtttgatactacaggtccctttgagcca
ttggttttgtcttcggatggtgaaattccagttgtacaggttccagcatctattaactgt
aggttgcttgaacatcaacgagaaggtgtaaagtttttatataacttgtataaaaacaac
caaggcggcattcttggcgatgacatgggactaggcaagacaattcaatcaattgcattt
ctttctgcggtgtatggaaaagatggtgaaaccagcgactccaaaatattgaaaggaaat
caggttggaaagaagagtcctgtgctaatagtttgccccacttcagttatccacaactgg
gagagtgaattctctacatgggcaaactttagtgtttctgtttatcatggtgcaaatcgt
gacttgattcttgagaaattggaaggatcagcagttgaagtgcttattaccagttttgac
tcatttagannnnnnnnnnnnnnttttgactgggtctcacttgganntcttggaacccgg
gagcattttcgtgagntctacgatgaacccttgaagcatggtcagagatcaactngccct
gaacggtttgtcagggttgctgacgagcggaaacaacacttgncggcagttcttcgtaaa
cacatgttaaggaggacaaaggaggagactattggacatcttatgatgggaaaggaagat
aacgttgtattttgtgcgatgagcgaactacaaaaacgagtgtataggagaatgttgcaa
ctaccagatatccagtgccttataaacaaagatcttccatgcagctgtggtagccctctt
aagcaggtggaatgttgcaaaaggattgtgccagatggaattatctggcgttaccttcac
aaggataaccctgatggctgtgattcgtgccccttttgcctggttcttccttgccttgcc
aagctccaacaggttttccttatatctactcgagctggtgggcttggattgaatcttgta
agtgcaaatcgtgttgtcatatttgacccgaactggaatccagcacatgatttgcaggct
caagataggtcatttcgatttggtcagaagcggcatgttgtggttttccgccttcttgca
gctggttcacttgaagagcttgtttattcccgtcaagtttataagcagcagctatcaaat
attgctgtgtctgggaaaatggaaaaacgatactttgaaggtgttcaggattgcaaggag
ttccaaggagagctttttggaatctgtaatctattccgagatatttctgataagctattt
accagcaatatcattgaattacatgacaaacaagggcgttttgttcatgatcaaaatgta
aagcatgaaacaactgaacttggggcttatacttcatctaaagacggtgtaacaggatcc
aagaccaaacaacctagtgatctagaagaaactacttcccagaagctggcacttgaagaa
ttcggtatcttgtatgcacatcgtaatgaagatgttgtgaattatggacctgggctccaa
ggaatgataaaagctagcgttcctcaggatgataactcggggcagacaattatccctgtt
gtaaagaaaagaaaacagtctgatgtaaatgggaaagagaatatttcgtcatctaaagac
cagaaaaagatccaatataatctcatttctcagttcgtgggtatggaagtgatagagttt
agcaagtgggtactggctgctaccccatcagagagggagaaagtcctacgtgactataag
aagagaaaagagaagagaccgaatggatga

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