Carica papaya (papaya): 110813470
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Entry
110813470 CDS
T05151
Name
(RefSeq) transcription factor SPATULA
KO
K12126
phytochrome-interacting factor 3
Organism
cpap
Carica papaya (papaya)
Pathway
cpap04075
Plant hormone signal transduction
cpap04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110813470
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110813470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpap03000
]
110813470
Transcription factors [BR:
cpap03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110813470
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
110813470
NCBI-ProteinID:
XP_021896315
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All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MSQQAPFCEIRASSGDEVDGSSSNHGDGSIFPVSASPELNPLSQIFSSFTYCGAEADCFQ
DVWGSLPDYQLDSTAQNVLDNMPARDSGCEVNEGDSAGRKRGFDETGYRRCSSEEPNEVS
RESKRRLNERPKRTRSAELHNISERRRRDRIKGKMRALQELIPNCNKLDRASMLDDAINY
LKALKLQVEMLSTGGGTPCQFLHMSPAGIQSMQFPQFSPFVPLRQGLGLGMGLGFGTGML
GACFSTNLHPSLLATATRLPLISGCGEFPFSHMQNPFFHSQTLPEAAASSSSLQAFLAGF
SPALNCSNKGDFVCQSEATGSINYKH
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcaagcgccgttttgtgagattagagctagttcaggggatgaagttgatggg
tcttcaagcaaccatggagatggttctatttttcctgtttctgcgtcacctgagctcaac
ccattgtcccaaatctttagttccttcacttactgtggtgcggaggcagactgctttcaa
gatgtttggggaagtttacctgattatcagcttgactcgactgcacagaacgtgttggat
aatatgcctgcgagagactcaggttgtgaagtgaacgaaggtgactcagctgggaggaaa
agggggtttgatgaaactggttatcgaagatgtagtagcgaagagcctaacgaggtgtct
agagaatccaagagaaggctaaatgagcggcctaaaagaacacgctcagctgaattacat
aacatctcagagaggaggcgaagggaccggatcaagggcaagatgagagctttgcaagag
ttgatacccaactgtaacaagttggatagagcttccatgcttgatgatgcaataaactat
cttaaagccttaaagcttcaagttgaaatgttgtccacgggcggaggaacaccatgccaa
tttcttcatatgtctccagctgggattcaaagcatgcaatttcctcagttttctccattt
gtccccttgagacagggtttgggattgggaatgggcctgggatttggcacgggaatgctt
ggagcatgcttttcaactaatctccatccttctctgttagcaactgctacgagattgcct
ctgatttctggatgtggggagtttccattctcccacatgcaaaatccattttttcattcc
caaaccttgcctgaagcagctgcctcatcgtcctcgctgcaggcgttcttagcagggttt
tcccctgcattaaactgttcaaataagggagattttgtttgtcaaagtgaagcaactggt
agcattaattacaagcattaa
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