KEGG   Chaetura pelagica (chimney swift): 104385255
Entry
104385255         CDS       T08631                                 
Symbol
ACTB
Name
(RefSeq) actin, cytoplasmic 1 isoform X1
  KO
K05692  actin beta/gamma 1
Organism
cpea  Chaetura pelagica (chimney swift)
Pathway
cpea03082  ATP-dependent chromatin remodeling
cpea04145  Phagosome
cpea04210  Apoptosis
cpea04510  Focal adhesion
cpea04520  Adherens junction
cpea04530  Tight junction
cpea04810  Regulation of actin cytoskeleton
cpea04814  Motor proteins
cpea04820  Cytoskeleton in muscle cells
cpea05100  Bacterial invasion of epithelial cells
cpea05132  Salmonella infection
cpea05164  Influenza A
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104385255 (ACTB)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    104385255 (ACTB)
  09143 Cell growth and death
   04210 Apoptosis
    104385255 (ACTB)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104385255 (ACTB)
   04520 Adherens junction
    104385255 (ACTB)
   04530 Tight junction
    104385255 (ACTB)
  09142 Cell motility
   04814 Motor proteins
    104385255 (ACTB)
   04820 Cytoskeleton in muscle cells
    104385255 (ACTB)
   04810 Regulation of actin cytoskeleton
    104385255 (ACTB)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    104385255 (ACTB)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104385255 (ACTB)
   05100 Bacterial invasion of epithelial cells
    104385255 (ACTB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpea03021]
    104385255 (ACTB)
   03019 Messenger RNA biogenesis [BR:cpea03019]
    104385255 (ACTB)
   03036 Chromosome and associated proteins [BR:cpea03036]
    104385255 (ACTB)
   03029 Mitochondrial biogenesis [BR:cpea03029]
    104385255 (ACTB)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cpea04812]
    104385255 (ACTB)
   04147 Exosome [BR:cpea04147]
    104385255 (ACTB)
Transcription machinery [BR:cpea03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     104385255 (ACTB)
Messenger RNA biogenesis [BR:cpea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     104385255 (ACTB)
Chromosome and associated proteins [BR:cpea03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     104385255 (ACTB)
    NuA4 complex
     104385255 (ACTB)
  Chromatin remodeling factors
   BAF complex
    104385255 (ACTB)
   PBAF complex
    104385255 (ACTB)
   GBAF(ncBAF) complex
    104385255 (ACTB)
   SWR1 complex
    104385255 (ACTB)
Mitochondrial biogenesis [BR:cpea03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    104385255 (ACTB)
Cytoskeleton proteins [BR:cpea04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     104385255 (ACTB)
Exosome [BR:cpea04147]
 Exosomal proteins
  Proteins found in most exosomes
   104385255 (ACTB)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 104385255
NCBI-ProteinID: XP_009991991
LinkDB
Position
Unknown
AA seq 355 aa
MCKAGFAGDDAPRAVFPSIVGRPRHQVGGWDSYVGDEAQSKRGILTLKYPIEHGIVTNWD
DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL
SLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA
LFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL
APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgtgcaaggccggtttcgccggggatgatgccccccgtgctgtcttcccatccatcgtg
ggtcgtcccagacatcaggtaggtggctgggacagctatgtgggtgatgaagcccagagc
aaaagaggcatcctgaccctgaagtaccccatcgaacacggtattgtcaccaactgggat
gacatggagaagatctggcaccacaccttctacaatgagctgagagtagcccctgaggag
caccctgtgctgcttacagaggctcccctgaaccccaaagccaacagagagaagatgaca
cagatcatgttcgagaccttcaacaccccagccatgtatgtagccatccaggctgtgttg
tccctgtatgcctctggtcgtaccactggtattgtgatggactctggtgatggtgttacc
cacactgtgcccatctatgaaggttatgccctccctcatgccatcctccgtctggatctg
gctggccgtgacctgacggactacctcatgaagatcctgacagagaggggctacagcttc
accaccacagccgagagagaaatcgtgcgtgacatcaaggagaagctgtgctatgtcgcc
ctggattttgagcaggagatggccacagctgcctctagctcttctctggagaagagctat
gaactccctgatggccaggtcatcaccattggcaatgagaggttcaggtgccccgaggcc
ctcttccagccatctttcttgggtatggagtcctgtggtatccatgaaactaccttcaac
tctatcatgaagtgtgatgtggatatccgtaaggacctgtatgccaacacagtgctgtct
ggtggtaccacaatgtaccctggcattgctgacaggatgcagaaggaaatcacagccctg
gcacccagcacaatgaaaatcaagatcattgccccacccgagcgcaaatactctgtctgg
atcggaggctccatcctggcctccctctccaccttccagcagatgtggatcagcaagcag
gagtacgatgaatccggaccctccattgtccaccgcaaatgcttctaa

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