Chaetura pelagica (chimney swift): 104385645
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Entry
104385645 CDS
T08631
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03440
Homologous recombination
cpea03460
Fanconi anemia pathway
cpea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104385645 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
104385645 (BRCA1)
03460 Fanconi anemia pathway
104385645 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpea01009
]
104385645 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104385645 (BRCA1)
03036 Chromosome and associated proteins [BR:
cpea03036
]
104385645 (BRCA1)
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104385645 (BRCA1)
Enzymes [BR:
cpea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104385645 (BRCA1)
Protein phosphatases and associated proteins [BR:
cpea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104385645 (BRCA1)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104385645 (BRCA1)
Multi subunit type E3
BRCC complex
104385645 (BRCA1)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104385645 (BRCA1)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104385645 (BRCA1)
BRCA1-A complex
104385645 (BRCA1)
BRCA1-B complex
104385645 (BRCA1)
BRCA1-C complex
104385645 (BRCA1)
BRCA complex
104385645 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
104385645 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
BRCT_2
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_6
zf-Nse
BRCT_3
zf-RING_5
RTT107_BRCT_5
zf-RING_10
Prok-RING_4
DUF2018
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
104385645
NCBI-ProteinID:
XP_009992426
LinkDB
All DBs
Position
Unknown
AA seq
1731 aa
AA seq
DB search
MAFSAVAVGDVQNVLSAMQKNLECPICLDMVEEPVSTKCDHVFCRFCMFKLFSKKKKGVI
QCPLCKTEVTKRSLKENSRFKQLTEGLLEIICAFELDTGVKFLNCHHFPKASPGATAAEL
LSKESSVIQSKGFRKRKKSAKESGQENCALHEATVDKQLTDTRIKKCLLREQKYNSGKGT
YIEFGSDSSEDLSKQASITGLEDKEAFQVSSQEKLEELRSAEKCDIQPAKLGAKEIVLPS
VIGESDSSKEGLNKKSTPSITECAKPDPVNMMGYKSCPLNFLAIDLLAEECNRIDNDSPF
MNGDAEEMEAEQTQCSSKSKEFDLKGNSESRLDKSKEIGIAVQSVEAVEMYEPENDSSHK
KELPLEKLLQPEKLHCATPNQVSRKRLKRSIQKVNEWFSKSNEILSSNSSQNDSAGATNV
SGGRDTCSSDEDSCVSEKTDPMVDSMKIAVMEENKRWSKEKVDSIKDKIFGKTYKRERKS
NHPVMLRDILPTTKKADETANEKCLNSSSKDRIKGEGKIASVLQPKDVIKQKYIEEADGC
PQSVNWYLGATEKKRCDESSAINESDLPENREEDKLAELKEGEGFIWNEATEKVTSELHD
EELQLNSCDQKSTKKGSAAKRCRRSTRTVCALELVVDINSVSPDPAEPQIDSYPSSEEPR
KGQSEQRKVRRSRRLQLLSEEMTKETRKDVVIKGARKYDSDHGIQRNVLVHASECKDLCD
PQSMLSDKPLADLKGGDLEANKIPISINNSSDAAETEKSLFNPTSSCQHSNCSSFVPDTG
SQEDAILGNPFLLQSPSIPVKQTASQLTEEMTESCIAFPQGSGNNIKNIPENLRTEKVPV
TKKVSELTKEAEDSELDTQYLRNVFRHSKRQSFSLYPTPMKEHTVQDAASEAVKVSCVDK
EENKHSKHLIAENLQEEKATAESFGRICEKEKLKTHETACINPVTCFVSTTEYMHTGEHQ
EDVSQVANQGNLTPIRMGAARTEDKTRSQKGEQGNGETMSINIGVESELRQSPIKSNRRQ
SDQSDTEEHIFKITDLNTVNEICLSSENSRAGKAEVVDSKRPILHFQSRFMRATGRQKPP
EFSCEVIGKSSKRESQQVKGNEEQETQTASTGMPECLVTETLEEPKVSSGCTGLSETPDG
LLCSDDDTEENTNISETDRRERSAVFVKKSDKALIKELHNRKVSSKPRSQGIRRSRRKAQ
KLQSSDEESSEDEDLPCFQTLIFGKSVSTPLQINKQVTSVVESSVSPITLPYNGRHYHND
MQKMPEAALSNGCVSPSQESECSVNLFSSQSNVSEESGDGALELKKPLIQVHTSKQVSNE
NDGKDIFQSCNGPLKRSKTSFKDECQEDPNMGVKLGEASGYDSETSNVEGSCEPFSQGEI
LTTQQKNAMQNNLKKLQQEMAVLEAVLKQHGSHDKKEEIVSRSNFPFHSENTEQKSGTRL
NSPSVLSNLSGNVAESPNNSSSSVRLLNLQTAEATDSSVVAQNANKSCTQERKLKRNVRF
AVAVLPDAAGKENNASPVVTNRKEMSIVVSGLNQSEHLVVQKFARKTQSTLSNHFSEGTT
HVIMKTDKELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEEKILDEENFEVRGDVINGRN
HQGPKRARESRTGKIFKEFEICCYGPFTDMTTEHLEWMVELCGASVVKQLHLFTHRKNST
AVVVVQPDAWMGNMDYKAIQQKSNVAVVTREWVLDSVACYECQEMDAYLVS
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atggccttctcagccgttgctgttggagatgtacaaaatgtgctttcagcaatgcagaag
aacttggagtgcccaatatgcttggatatggtagaagagccagtttctacaaaatgtgat
cacgtattctgcaggttttgcatgttcaaactcttcagcaaaaagaaaaaaggtgtgata
cagtgtcctctgtgtaaaactgaagttaccaagagaagtctgaaagaaaattccagattt
aaacaactaactgaaggattgttggagattatctgtgcatttgagcttgacactggagtg
aagtttttaaactgtcatcactttcctaaagcatccccaggagccactgctgctgaattg
ctcagtaaagaaagttctgtcatccaaagtaagggcttcagaaagaggaaaaaaagtgct
aaagaaagtggacaagaaaactgcgccttgcacgaagccactgtggataagcagcttaca
gataccaggatcaaaaagtgtctcctaagagaacagaaatataactctggaaaagggact
tacatagagtttggctctgattcatctgaagatctttctaaacaggcaagcattactggg
ttagaagacaaagaagcatttcaggtttcatctcaagaaaagctggaagagcttaggagt
gctgagaagtgcgatatacagcctgccaagctgggtgctaaagaaattgttctaccaagc
gtcataggtgaaagtgattcctcaaaggaaggcttgaacaagaaaagcactccaagcatc
actgagtgtgccaaacctgaccctgtgaatatgatgggatacaagagttgtcctttaaat
tttcttgccatagacctacttgcagaggagtgcaacagaatagataatgacagtcccttc
atgaatggggatgcagaagaaatggaagcagagcaaacccaatgtagtagtaaaagcaaa
gagtttgacttaaaaggtaactcagagagcaggctagataaaagcaaggaaataggtatt
gctgtacaaagtgtggaagctgtggaaatgtatgaacctgaaaatgattcttcccacaaa
aaagaacttcctcttgagaaactacttcagccagagaaacttcactgtgctaccccaaat
caagtctcgaggaagagactgaagcgaagcattcagaaagtcaatgaatggttctcaaaa
agcaacgagattctgtcttccaattcttcccagaatgattctgctggagcaactaatgtt
tcaggtggaagagatacatgttcatcagatgaagattcctgtgtttcagaaaagactgac
cctatggtagattccatgaaaattgcagtgatggaagaaaataagagatggtcaaaagaa
aaagtggatagcatcaaagacaaaatatttgggaaaacatacaagagagagaggaagtca
aatcatccagttatgttgagagacattttacctactaccaaaaaagcagatgaaactgct
aatgagaagtgcttgaatagttccagcaaagacagaataaaaggagaagggaaaattgcc
tctgtcctgcaacctaaggatgtaatcaagcaaaaatatatagaagaggcagatgggtgc
cctcagagtgttaactggtaccttggagcaactgaaaagaaaagatgtgatgaaagttct
gctattaatgagagtgacctccctgagaacagagaggaagataaactagcagaacttaaa
gaaggagaaggtttcatatggaatgaagctactgaaaaggtgaccagtgagctccatgat
gaggagctacaactgaacagctgtgatcagaaaagcacgaaaaaaggttctgcagcaaaa
agatgcaggcgttctactagaactgtgtgtgctctagagttagtagtggatataaactct
gtttcccctgatccagctgagccacagatcgacagctatccaagcagtgaagaaccaagg
aaaggtcagtctgagcaaagaaaagtcaggcgcagcaggaggcttcagctactttctgaa
gaaatgacaaaagaaacaagaaaagatgtagtaattaagggagccagaaagtatgacagt
gatcatggaattcaaaggaatgtgttagttcacgcttctgaatgcaaggacctgtgtgac
ccccagagtatgttgagtgacaagccactggctgatctgaagggaggtgatctggaagca
aacaaaataccaattagcataaataattcatctgatgcagcagagactgaaaaaagtctc
ttcaatcctacatcttcatgtcagcattccaattgtagttcctttgtacctgatacaggt
tctcaagaagatgcaatacttggtaatcctttccttctacagtctccttcaatacccgtt
aagcaaactgcttcccagctgactgaagaaatgactgaatcgtgtattgcttttccccag
ggtagtggaaacaatataaaaaatattccagaaaacttaagaactgaaaaggtgccagtg
actaaaaaagtgtcagagttgaccaaagaagctgaagacagtgagttagatacacagtat
ctgcgaaatgtatttaggcattcaaaacgccaatcatttagtctttatcctactcccatg
aaggagcatacagtacaagatgctgcttctgaagctgtaaaggtatcatgtgttgataag
gaagaaaataagcatagcaaacacttaatagcagaaaacttgcaagaagagaaagcaact
gctgaaagctttgggaggatttgtgagaaagagaagcttaagacacatgaaactgcttgt
atcaatcctgtgacttgctttgtcagcaccactgaatatatgcacacaggggaacaccaa
gaagatgtttcacaggttgcaaatcaagggaacctgacaccaataagaatgggtgctgct
aggactgaagacaaaaccagatcacaaaaaggagagcagggaaatggagagacaatgtca
attaacataggggtagaaagcgagttgagacagagtccaatcaaaagtaatagaaggcaa
agtgatcagagtgatacagaagagcacattttcaaaataactgatttaaacacagttaat
gaaatatgcctcagttcagaaaacagtcgggcaggaaaggccgaagttgttgacagcaaa
agaccaatactacattttcagtccagatttatgagagcaactggtaggcaaaagcctcct
gaattcagttgtgaagtcattgggaaaagtagcaaaagagaaagtcagcaagtaaagggg
aatgaagaacaagaaacccaaactgctagcacagggatgcctgagtgtttagttacagag
actctagaagaacctaaagtgagtagtggttgtaccggtttgtctgaaactcctgatggg
ttactgtgctctgatgatgatactgaagagaacaccaacatttctgaaactgataggaga
gagagatctgctgtgtttgtaaaaaaaagtgacaaagccctgataaaagaactacacaat
agaaaagttagttctaagccaagatctcagggtatccgaagatctcgaagaaaggcacag
aaactgcagtcttcagatgaagagtctagtgaggatgaagatttaccatgttttcagaca
ttaatatttggcaaatcagtaagcacacctttgcagatcaataaacaagtgacatctgtg
gtagagtcttcagtaagtcccatcacattgccttacaatggaaggcattatcacaatgac
atgcagaaaatgcctgaagctgccctaagcaatggctgtgtttcaccaagccaggagtca
gaatgctctgtcaatttattttcttcacagtccaacgtgtccgaagaatcgggtgatgga
gcactagagctgaagaaacctttaatacaagttcatacatccaaacaagtgagcaacgag
aatgacggtaaagacatttttcagagttgtaatggaccactgaagagaagcaaaactagc
tttaaagatgaatgccaagaagatccaaacatgggagtaaaactaggtgaagcttctgga
tatgacagtgaaacaagtaatgtggaaggttcttgcgaacccttctctcagggtgaaatc
cttactacacagcagaagaatgctatgcaaaataacctaaaaaaacttcagcaagaaatg
gctgtacttgaagcagttctaaagcagcacggaagtcatgacaagaaggaggaaattgtt
tcaaggagtaatttcccatttcattcagaaaatactgagcagaaatctgggaccaggcta
aacagtccgtctgtcttatcaaatctctctggaaatgtggctgagagtccaaataattct
tcttcctctgtaaggctccttaaccttcagactgcagaagcaacagatagttctgttgta
gctcagaatgctaataaaagctgcactcaagaacgtaaactgaagagaaatgtacgtttt
gctgtagctgttctgcccgatgcagctgggaaagaaaacaatgcaagtcctgttgtgact
aacaggaaagaaatgtcgattgtggtatcaggtctgaatcaaagtgaacatttggtggtc
cagaagtttgcaagaaaaactcagagtactttatctaatcacttttctgaaggaacaacc
catgtcataatgaaaacagataaggagctggtgtgtgagcggacactgaagtactttctg
ggtattgcaggaagaaaatgggtagttagttatcagtgggtaatccagtcttttaaagaa
gaaaagatactggatgaggagaactttgaagttagaggagatgtaatcaatgggagaaac
caccaaggtcctaagagggctagagaatctcggactggaaagatctttaaagagtttgag
atctgttgctatggacctttcactgatatgactacagaacatctagaatggatggtggag
ctttgtggtgcctctgtagtgaagcaacttcatctgttcacacacagaaaaaattctact
gctgttgtggttgtgcagccagatgcttggatgggaaacatggattacaaagcaatccag
caaaagagcaatgttgccgtagtgactcgagagtgggtattagacagtgttgcttgctat
gagtgccaggagatggatgcttaccttgtgtcctaa
DBGET
integrated database retrieval system
