Chaetura pelagica (chimney swift): 104386422
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Entry
104386422 CDS
T08631
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104386422 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpea03000
]
104386422 (KDM2A)
04121 Ubiquitin system [BR:
cpea04121
]
104386422 (KDM2A)
03036 Chromosome and associated proteins [BR:
cpea03036
]
104386422 (KDM2A)
Enzymes [BR:
cpea01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
104386422 (KDM2A)
Transcription factors [BR:
cpea03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
104386422 (KDM2A)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104386422 (KDM2A)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
104386422 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
104386422 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
Cupin_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
104386422
NCBI-ProteinID:
XP_009993333
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MRRRYEDDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLI
FRSSDGLGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIEMSMAQWARYYETPEAER
EKLYNVISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQ
KYCLMSVKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIF
LGDRVSECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDR
TRVPNKFRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSDSVNMEEEE
EEEEDEDAAGKEPRRPITRRSILTSPIANGANVDYDELGKSCRSSLPGLKKTPSIDSSDS
SRGSQNGQAWEPPAGGSPRKTRRVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDA
LIADVKLLLEEYANSDPKLALTGVPIVQWPKRDKLKLQARLRVRLPTIPITKPHTMKPAP
RPTPVRSTVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQ
CLAPRLPHSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPN
CWECPKCYQGDDAEKGQRARQQAKARFLQKRPGQRGFSSRWQAASVRRQLVCWPLPVSPG
TPAHGDDRYRRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKLHGSYLTVTLQRPTK
DVHGTSIVPKLQAITASSANLQHSPRLLMRHPPARIPLRGGGEEEAAAEEEEEEEDEEEE
ENAEEGGEARLNGRGARVQEGEESWMQREVWMSVFRYLTRRELCECMRVCKTWYKWCCDK
RLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNRLPGLKDLILAGC
SWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDNRSKLRNMIDFRLA
GLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRNSLTELNMAGCNKL
TDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggcgttacgaggatgatggcatctctgatgatgaaattgaagggaagaggaca
tttgacctggaggagaagctgtccaccaacaagttcaactccaccttcgtggtcttcatg
gaaggcaaagacttcacagttgaatacatccagcggggtggcctaagggaccctctcatc
ttcaggagctctgatggcctggggataaagatgccagatccggacttcagcgtcaacgat
gtgcggctgtgtgtggggagcagaaggatggtggatgtcatggatgtgaacacccagagg
gacatcgagatgtccatggcacagtgggcacgttactatgagacaccagaggctgagagg
gagaagctttacaatgtcatcagcctggagttcagccacaccaagctggagaacctggtg
cagagacctgctacggtggatttgattgactgggttgataacatgtggcccagacacctg
aaggagagtcagacagagtctacaaatgccatcctggagatgcagtatccaaaggtgcaa
aagtactgtctgatgagtgtcaagggctgctatacagatttccacgtggactttggtgga
acttctgtgtggtaccacatccaccgagggggaaagatcttctggctgatccctcctacg
ccccagaacctggagctctatgaaaactggcttctctcagggaagcagggagacattttc
cttggggatagagtgtctgagtgccagcgcatcgagctcaagcagggctacacatttgtc
atcccctcaggttggatccatgctgtgtacactcccatggacacgctggtttttggaggc
aacttcttacacagcttcaacatccctatgcagctccggatctacagcatcgaagaccgc
acacgggttccaaataagtttcgttatcccttctattacgagatgtgttggtacgtgctg
gagcgttacgtctactgcatcaccagccgctcccacctcaccaaggacttccagaaggaa
tctctcagtatggatatggagctgagctcctcggactcagtgaacatggaagaggaggag
gaggaggaagaagatgaagatgcagcagggaaggagcccaggcgaccgatcaccaggagg
tccattctcaccagccccatagccaatggtgccaatgtggactatgatgaactgggcaag
agctgcaggagcagcctgccggggctgaagaagaccccatctatagactcttccgactcc
agccggggctcccaaaacgggcaggcctgggagccgccggcgggtggcagcccccgcaag
acccgcagggtgcacctgacacagtttgagctggaggggctgcgctgcctggtggacaaa
ctggagtccctccctctgcacaagaagtgtgttcccaccggcatcgaggacgaggacgcc
ctgatcgccgacgtcaagctgctgctagaagaatacgccaacagcgatcccaaactggca
cttacaggcgtccccatcgtccagtggcccaagagagacaagctaaagctccaggcccgg
ctgagggtacgcctgcccaccatccccatcaccaagccacacaccatgaagccagccccc
cgcccgacccccgtcaggtccacggtgtcccccatcgtgtccggcgccaggcggaggcgg
gtgcggtgccggaaatgcaaggcctgcatgcagggagagtgtggcatgtgccactactgc
agggacatgaagaagtttgggggacctggccgcatgaagcagtcctgcgtcctccggcag
tgcttggcgcccaggctgcctcactcggtcacgtgtgcactttgtggggaggtggatcag
aatgaggactcgcaggactttgagaagaagctcatggagtgctgtatctgcaatgagatt
gtgcaccctggctgcctgcagatggatggggaagggctgctcaatgacgagctccccaac
tgctgggagtgccccaaatgctaccagggtgacgacgcagaaaagggccagagagcccgc
cagcaggccaaggccaggttcctgcagaagaggccggggcagcggggcttctccagcagg
tggcaagcagccagcgtgcggcggcaactggtctgctggcccctgccagtgtcacctggg
acaccagcccacggagacgaccgctacaggcggcggcagctgctgcggctccaggccacc
gagaggaccatggtgagggagaaggagaacaaccccagtggcaagaaggagctgtcggag
gtggagaaggccaagctgcatggctcctacctcaccgtgaccctccaacgccccaccaaa
gacgtccacggcacttctatcgtccccaagctgcaagccatcaccgcctcctccgccaac
ctgcagcactccccgcgcctgctcatgcggcacccgcccgccaggatccccctgcggggc
gggggggaggaggaggcagctgccgaggaggaggaggaggaagaggatgaagaggaggag
gagaacgctgaggaaggaggggaggcccggctgaacgggcgaggggcccgggtgcaggag
ggcgaggagagctggatgcagcgcgaggtctggatgtccgtcttccgctacctcactcgc
agggagctctgcgagtgcatgcgggtgtgcaagacctggtacaagtggtgctgtgacaag
agattgtggacaaagatagatttgagcaggtgcaagtccatcaccccgcaggcgctgagc
ggcatcatcaaaagacaaccagttagccttgacctcagctggaccaatatctccaaaaaa
cagctcacgtggcttgtcaacaggctgccaggcctgaaagacctcatcttagcgggctgt
tcctggtctgcagtctgtgctctcagtacctccagctgcccccttctcaggaccctcgat
cttcggtgggcagtaggaatcaaggaccctcagatccgggatttactcacacccccgaca
gacaaacccagtcaggacaatcgcagcaaactccgcaacatgatcgatttccggctcgcc
ggcctggacatcacggacgccaccctgcgcctcatcatccgccacatgcccctgctctcc
cgcctcgacctcagccactgcaaccacctcacggaccagtcagccaacctcctcacggcc
gtgggctcctccacacgcaactccctcaccgaactcaacatggcaggctgcaataagctg
acggaccaggccttgctctacctgcgccgcatctccaacgtcaccctcatcgacctgcga
ggttgcaaacagatcacccgcaaagcctgtgagcacttcatctcggacctgtccatcaac
agcctctactgcctgtctgatgagaagctgatccaaaaaatcagctag
DBGET
integrated database retrieval system
