Chaetura pelagica (chimney swift): 104388096
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Entry
104388096 CDS
T08631
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104388096 (RNF123)
Enzymes [BR:
cpea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104388096 (RNF123)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104388096 (RNF123)
Multi subunit type E3
KPC complex
104388096 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
DUF7050
Motif
Other DBs
NCBI-GeneID:
104388096
NCBI-ProteinID:
XP_009995218
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MMSRGAGTAFSRKNYRLSTEPEKSKVTGIVNSRLLNDYLHCVFTSTDGNQPAAAYRKHLT
FQNLQEHIDRLLAEENGSEDSRDQVAEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGISLGTAFDNISRGAGMAYFPGISL
SFKESVAFNFGSRPLRYPVEGYRPLQDPPVADLVKARKLLGYLKNVIHIGIDVTEGKLVE
KDMSTWQLQGEPTVLITLAHIFNYFSPLMCKVYLVEDVLMTFLLSILERGGAVEAHPLIQ
QLLDLMWLLMEEYEVHECLKQLLMSLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSRK
YLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKENKEVKEESAEE
RLRRRAYERGCQRLKKRIEVVEGLQVQILKLLLNNKDRGGGEASRYIFLNKFRKFLQENA
SNRGNLTVLCPPEYMVCFLHRLIAALRFFWDGHKAKTPAALSSEEAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLAAKANVLIDPAELQAVTMDDLDEDEESATSAAQSQRPSA
ALAIGGALARPGWLSSPTPGRAHRFLSSTAAVSLMNPRRPLGALEKIKVRTLSVEQRTEE
DIEGSHGNEGLLLGRPPEEPDQPITENSLLEILDGIVMMYNLSVHQQLGKMVGVSDDVNE
YAMALKDTEEKISRCPKRRRDIHEELLKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDI
YWLLRVCIRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEELPGYEETLM
RLAAILAKHFADSRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRISMMKNLLAPY
EQRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKIKPEDASLPSLQKPCPSTLLQRHMADL
LRSDRDLAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLS
VSLLRVLEMTVTLAPEIFLDWNRPSSELLLRRLAQVLSXXLNRVTAERNLFDRVVNLRLP
GLESVDHYPILVAVTGILVRLLVDTDLQGAERATAVLLADPCLQLRSIQYLLGHTEPSAL
AAAAPATDKRHFSLQTYTEYISAEELAKVDKMLSHLSEESKQAAATTLPTSEEDLCPICY
AHPISAIFRPCSHKSCKACINQHLMNNKDCFFCKATITGVDDFTKPASS
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgagaggtgctgggactgctttctcgaggaagaactacaggctgagcaccgag
ccagagaagtccaaggtcacagggattgtgaacagcaggctgctgaatgattatctgcat
tgtgtcttcaccagcactgatgggaaccagcctgcagctgcttacagaaagcacctgacg
ttccagaacctgcaggagcacattgaccgcttgctagcagaggagaatggctctgaagac
agtcgagatcaggtagcagagggccggcttggtccctctacagtggtgttggaccacacg
agtggctttgaggggctcctgctcgttgatgatgacctacttggggtgattggccacagt
aactttgggtccatcagggccacaacgtgtgtgtataaagggaaatggatttatgaggtg
ctcatctcctcccagggactcatgcagattggctggtgtactctcaactgcaggtttaat
caggaggaaggggttggagatacaccagattcatatgcttatgatggaaacagggtgcgc
aagtggaacgtgactacgaccaactatggcaaatcttgggcagcaggagacatcgtcagc
tgtctgatagaccttgatgagggcaccattgctttctgcttgaatggcatatctctggga
actgcttttgataacatctcaaggggtgctggaatggcttacttccctggcatcagcctc
tccttcaaagagtccgttgcatttaacttcggaagccgcccgctccgttatccagtggaa
ggctaccgccccttgcaggatcctcccgtggcagacctcgtgaaggctcgcaagctgttg
ggctacctgaagaatgtgatccatattggaatagatgtcacggaggggaagctggtggag
aaggacatgtccacgtggcagctgcagggagaacccactgtgttgattacgctggcccac
atcttcaattatttctctcctctcatgtgcaaggtgtacctggtggaagatgtgctcatg
accttcctgctgagcatccttgagcgaggaggggcagtggaggcccatcctcttattcag
cagctgctggatctcatgtggcttcttatggaggagtatgaagtgcacgagtgcctcaag
cagctgctgatgtccctgctgcgggcttacaggttctcccccatcatcccagacctggga
ttacaaattcactacctccggctcaccattgcagtcctgaagcatgagaaatccagaaaa
tacctactcagcaatgttctcttcgatgtgctccgttctgttgtgttcttctacattaag
agcccgctgcgtgtcgaggaggctggtttgcaggagctcattcccaccacgtggtggcca
aaccgcttcaccaaagagggcaaggagaataaggaggtgaaggaggagagtgctgaggag
agactgagacggagggcgtatgaaagaggctgccagcggctcaagaaacgcattgaagtg
gtggaaggtctccaggttcagattctgaagctgctgctgaacaacaaggacagaggaggg
ggggaagcctccagatacatcttcctaaacaaattccgcaagtttcttcaggagaatgct
agcaacagagggaatctgactgtgttgtgcccaccagagtacatggtgtgcttcctgcac
cgcctcatcgccgccctgcgtttcttctgggatggccacaaggcaaagaccccggctgca
ctcagcagtgaagaagcttatgtccctcctcaactcttctataacgggaaggtggattat
tttgaccttcagcgacttggaggtctcctgtctcatcttaagaagactctgaaagatgac
ctggctgcgaaagccaatgtcctgatcgaccctgcagagctgcaggcagtgactatggat
gatcttgatgaagatgaggaatcagcaacatcagcagcacagtctcagcgtccctcagct
gccctggccattggtggagccctggccaggcctggctggctcagctcgcccacccccggc
cgcgcccaccggttcctcagcagcacggcagccgtcagcctgatgaacccgcggaggcct
cttggtgccctggagaagatcaaagtgcgcacgttgagtgtggagcagcggacagaagag
gacattgaaggcagccatggaaatgaaggtctcttactgggcagacccccggaggagcca
gaccagcccatcacagagaactccctcctggaaatcctggatggaatagtcatgatgtac
aacctcagtgtccaccagcagcttgggaagatggttggtgtttcagatgatgtgaatgaa
tatgccatggcactgaaagacacagaggagaaaatcagccgctgcccaaagaggaggaga
gacattcatgaggaactgctgaagagccaaaaggtcttctctgagaagctcaatcaccta
agccgacgtctcgcctggataaatgtcaccatttattcaaaggagaagatgcaggatata
tactggctgctgcgagtttgcatccgcaccattgaacacggcgacaggacgggctccctg
ttcgcgttcatgccggagttctacctcagcgtggctatgaacagctacagtgcactcaag
aactacttcagccctgtaaacagcatggaggaacttccaggctacgaggagaccctgatg
cgccttgctgccatcctggccaagcactttgctgactcaaggatcgtgggaacggacatc
cgggactccctgatgcaggcattggccagctatgtctgctacccccactcactgcgtgct
gtagagaggatcccagaggagcagcggatctccatgatgaagaacctcctggctccctat
gagcagcgaccctgggcacaaaccaattggatcctcgtgaggctgtggcggggctgtggc
tttgggtacagatacacccggctcccacacctgctgaaaatcaagcctgaggatgccagc
ctccccagcctgcagaagccatgcccctccaccttgctgcagcggcacatggcagacctg
ctccgcagtgaccgtgacctggcccccagcttcctcaacagtgtcctcaaccagctgaac
tgggctttctctgagttcattggcatgattcaggagatccagcaggcagcagagcgcctg
gagaggaactttgtggacagccgccagctgaaggtgtgtgccacctgctttgacctatca
gtgagcctgctcagggtgctggagatgaccgtcacgctggcgccagagatcttcctcgat
tggaatcgcccatcatcagagctgctgcttcgaaggcttgcccaggtattgtcnnnnnnn
ctgaaccgtgtgacagctgaaaggaacttgtttgacagagtggtcaacctccgtctgccg
gggctggagagtgtggaccattacccaatccttgtggctgtgacagggatactggtccgg
ctgctcgtggacactgatcttcagggggccgagcgtgcgacggcagtgctgctggcagac
ccctgcctccagctgcgctccatccagtacctgctgggccacaccgagccctcagccctg
gcagctgctgccccggccacggacaagcgccatttctccctgcagacctacacagaatac
atcagtgctgaggaactggcaaaggtggacaagatgctgagccacctgagtgaggaatcc
aagcaggcagctgccaccacactgcccaccagcgaggaggacctgtgccccatctgctat
gcacaccccatctccgcaatcttcagaccctgctcccacaagtcgtgcaaagcctgcatc
aaccagcacctcatgaacaacaaggactgcttcttctgcaaggccaccatcacaggggtg
gatgacttcaccaagccagccagctcatag
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integrated database retrieval system
