Chaetura pelagica (chimney swift): 104390225
Help
Entry
104390225 CDS
T08631
Symbol
PLEKHM1
Name
(RefSeq) LOW QUALITY PROTEIN: pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04140
Autophagy - animal
cpea05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104390225 (PLEKHM1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104390225 (PLEKHM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104390225 (PLEKHM1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpea04990
]
104390225 (PLEKHM1)
Membrane trafficking [BR:
cpea04131
]
SNARE
SNARE associated proteins
Others
104390225 (PLEKHM1)
Domain-containing proteins not elsewhere classified [BR:
cpea04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
104390225 (PLEKHM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RhoGAP
RUN
WW
PH
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
104390225
NCBI-ProteinID:
XP_009997631
LinkDB
All DBs
Position
Unknown
AA seq
1733 aa
AA seq
DB search
MHSSHSDDPKEAIRLIKQQLVAAIKALQKQYVTSDAVVTSDDGNANSLCSALEAVFVHGL
KGKHVKMESGGKGKKAGGRGPLPQPVFWGLLKSITHRNIVSELEQLIFITTDVGRCRAWL
RLALNDGLVECYLKLLLREKSRLPEFYQTTALLLDAEECEFLLSYLQGLTSLTFQLSYKS
AVLNEWTITPLSLSGLCPVSELLEPLTSSTSQPPRKASLGSISQSSGSDEIEVQPSVLPV
SRAGTKAKLTASTLSLNTTSSSQLSSSLGSDSILPPPVTCSPQGAEEPLSCNSHLGTATT
EELDRSLQEXVFSQISSPEGFKRKSWISEDDFYRPSPGESSEHEANTNGFGPEGPGEGPA
PGLISALDLERLSVPSLETGKPKMSPEGEQKGFSVVHRRQMGLSNPFRGLLKLGSLERRG
AMGIWKEFSCELSPLELRLFLAQEERICVESHSLLRCEALALTHPDGRFDLVFLGKKLSL
RAPSRDEAEDWLDRIREALHKCRPQVEEEEWETLEYPEDGGGEGQTSQGDSSALLQYDDV
PGNSLDWASAHEPELDAIKEAVLYVDMDKTWVPFIFSLSLETLKCFKVRNNEKILSNSYG
IETIQDILPDTSLGGPAFFKVITSKAVLKLQAENAEEAASWRELVRGVLMSYLESAEEAL
TLGGSLDGHSQVVLKNIVKENGFLLQYLVAIPVEKGLDSQSFICAGCSRQIGFSFAKPKL
CSFSGLYYCDSCHQDEETVIPSRLIHNWDLSKRGVCRQAFKFLTQIQNQPLIDLELVNQS
LYDHVERMRRIHQSREQLKLLGDYLTMCRSGALKELSKRLDHRHYLLECPHKYSVADLRQ
IADGGFETFLQALIQFASHHVYNCDLCTQRGFICQICNSSDIIFPFEFDTTSRCSDCRTV
FHRACHTSSQSCPRCHRRRHYRRPSDPPRDPLPTQGPSDPPRDPLIPPGTLSPTQGPSDP
PRQNGLKVYLKNERNRXLKRTNHHWWHVRRSGDTRPFYIPAQYVKELPPMAAPAPLSPPP
GQEPSASVPAQAFEYRFIRAGEPHGGCSVLPRRDSVPQKESVPRRDSVAQRDPVAQRDSM
PRKDSVPRKDSVPQRDLVAQRDSVPRRDLMPQRDLVTQRDPVAQRDSVPRRDSMLQRDPV
AQKDSVPRKDSVPRKDSAPQKDSVPQDSFSWGDSLPQRDTVPWRDVVTPRDAVPEELVSP
RDSAPALSSFRAPPGLSPQPVRPSHSLDDLGPRVVTALGSCGDPPGHPHPLGKSSSQTLC
GSSRDQDSRRWPGGGHGAQAQKELQEPPAPIYLNLQELQEEAPGARWVPEEPSRSMSDWE
THTDTSTGHLFYYNPVTGETTWDCPFGQGDDAVSPTTSATSSPTHSLEMSQWEQHLDQGS
GQAFFYNSVTGETSWDLPQGGDTASPRDVLPGVTRYGAMEHRRQPSSLSTPEHTVELAGA
TLAWATRDKSSKKHVLEDEPAALGVGKPHGCDELGPVLSPALSCARGHWGPGQGGDSDLS
RVRNKLRRFLQRRPTAQALRDRGYIRDPVFGCSLAALCERERGTVPRFVLQCIQSVERRG
LDIDGLYRVSGNLATIQKLRYKEGTGPLRCCHPTDEHLDLDDGRWEDVHLVTGALKLFFR
ELPEPLVPFSHFDQFIMAIKLQAPARRSRCLRDLVSSLPPAHHDTMQVLFRHLCRVVQCR
EQNRMSVQSVAIVFGPTLLRPPHEEGNMAMHMVFQNQVVEHILNHYSYIFPDG
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgcattccagccacagcgatgaccccaaggaagccattcggctgatcaagcagcagctg
gtggctgccatcaaggccctgcagaagcagtacgtcacctcggacgccgtggttaccagc
gatgatgggaacgccaacagcctgtgcagtgccctggaggctgtttttgtgcacgggctg
aagggcaaacatgtcaagatggagagtggggggaaagggaagaaggcaggaggtcgggga
ccccttccccaacctgtcttttggggtctgctcaagagcatcacgcatcggaacattgtc
tcagagctggaacaactcatcttcatcaccacggacgtggggcggtgccgggcctggctc
aggttggccttgaacgatgggctggtggagtgttacctgaagctgctgctgagggagaag
tccaggctgcccgagttctaccagacaactgctctgctcttggatgctgaggagtgtgag
ttcctccttagctacttgcagggcttgacgtccttaaccttccagctctcctataaatcg
gcggttctgaacgagtggaccatcacccccctgtccctgtctggcctgtgtcctgtctcg
gagctgctggagcccctcacctcctccacatcccaacccccccggaaagcatccctggga
tccatctcccagtcctcggggtcggatgagattgaggtccaaccttctgtcctgcccgtc
agcagggctggcaccaaggccaagctcacggcgtccaccctgagcctcaacaccaccagt
tcctcccagctctcctccagtctgggctccgactccatcctgcccccccctgtcacctgc
agcccccagggtgctgaggagccactctcctgcaactcccacctgggcacggccaccacc
gaggagctggacaggtctctgcaagagtgagtcttctcccagatctcctctcctgagggg
tttaaaaggaagagctggatctcagaagatgatttctacagaccttctccaggagagagc
agtgaacacgaggccaacaccaatggttttgggcctgaggggcctggggagggtcctgcc
ccagggctcatcagtgccctggatctggagaggctgtcagtgccatccttggagactggg
aagcccaagatgtcacctgaaggggaacagaaaggcttcagcgtcgtgcaccgccggcag
atgggtctttccaaccctttccgtggcctcctgaagttgggcagcctggagaggagagga
gccatggggatctggaaagagttttcctgcgagttgtcccctctggagctgaggctcttc
ttggcccaggaggagaggatctgcgtggagagccactcgctgctgcgctgcgaggcgctg
gcgctcacccaccccgacgggcgcttcgacctggtcttcctgggcaagaagctttccctg
agagctccttcccgggatgaggccgaggactggctggacaggatccgggaggctctgcac
aagtgccgacctcaggtggaggaggaggagtgggagaccttggagtatccagaggatggg
ggtggtgaaggtcaaaccagccagggcgactcctccgctctcctccagtacgatgatgtg
cctgggaacagcttggactgggcttcagctcatgaaccagagctggatgccatcaaagag
gctgttctctacgtggacatggacaaaacctgggtcccttttattttttccttgtcccta
gaaactctcaaatgctttaaagtcagaaacaatgagaaaattttaagcaacagttacggt
atcgagacaatccaggacatccttccagacacaagccttgggggacctgctttcttcaag
gtgatcacctccaaagctgtcctgaagctgcaggctgagaatgcagaagaagcagcttcg
tggagggagctggtcagaggggtcctcatgtcctacctggagagtgccgaggaggccctg
acgttggggggcagcttggatgggcactcccaggttgtcctgaagaacattgtgaaggaa
aatggcttcttgttgcaatacctggtggccatccccgtggagaagggcctggactcacag
agcttcatctgtgcaggctgctccaggcagattggcttctcctttgccaaacccaagctc
tgctccttctctggtctctactactgtgacagttgccaccaggatgaggagacagtgatt
ccctcccgcctcatccacaactgggacctgagcaagcgaggggtttgcagacaagctttc
aagttcctcacccagatccagaaccagccactgatcgacctggagctggtcaaccagagc
ctctatgaccacgtggagaggatgagacggatccaccagagcagggagcagctgaagctg
ctgggggattatctcaccatgtgtcgcagtggggccctgaaggagctgagcaagaggctg
gatcacaggcactacctcctggagtgtccccacaaatacagcgtcgctgacctgaggcag
attgctgatggtggctttgagaccttcctgcaggccctgatccagtttgcttcccaccac
gtctacaactgtgacctgtgcacccaacgtggcttcatctgccagatctgcaacagcagt
gacatcatttttcccttcgagtttgacacaacctccaggtgcagcgactgcagaaccgtc
ttccaccgggcctgccacaccagctcccagtcctgcccccgctgccaccgccgacggcac
taccgccgaccttctgacccacccagggaccctctgcccacccagggaccctctgatccc
cccagggaccctctgatccccccagggaccctctcacccacccagggaccctctgaccca
cccaggcaaaacggattaaaagtttatttaaagaacgagcgaaaccgnnngctgaaacgc
accaaccaccactggtggcacgtccggaggagcggggacacgaggcccttctacatcccg
gcccagtacgtgaaggagctgccccccatggctgccccagccccgctcagccccccgccg
gggcaggagccgagcgccagcgtcccggcccaggccttcgagtaccgcttcatccgggca
ggggagccccacgggggatgctccgtgctccccaggagggactcggtgccccaaaaggaa
tctgtgccaaggagggactcggtggcccaaagggacccagtggcccaaagggactcaatg
ccaaggaaggattcggtgcccaggaaggactcggtgccccaaagggacctggtggcccaa
agggattcagttccaaggagggatttgatgccccaaagggacctggtgacccaaagggac
ccggtggcccaaagggattcagttccaaggagggattcgatgctccaaagggacccagtg
gcccaaaaggactcggttccaaggaaggactcggttccaaggaaggactcagcaccccag
aaggactcggtgccccaggactcattttcctggggggactcgttgccccagagggacacg
gtgccctggagggacgtggtgaccccccgggacgctgttcccgaggagctggtgtcccca
agggactcagcaccagcactcagctcgttccgggcccccccggggctgagcccccagccc
gtgcgtccctcacactccctggatgacctgggcccacgtgttgtcaccgccctggggtcc
tgtggggacccccctggacaccctcatccccttggcaagagcagctcccagaccctctgt
ggctccagcagggaccaggacagcaggaggtggcccgggggtggccatggggctcaggca
cagaaggagctgcaggagccacctgctcccatctacctcaacctccaggagctgcaggaa
gaggccccgggtgcccgttgggtgcccgaggagcccagcaggtccatgtcagactgggag
acccacacggacaccagcactggacacctcttctactacaacccggtgacgggcgagacc
acctgggactgtccctttgggcagggggacgatgcagtgagtcccaccacctcggccacc
tcctcgcccacccacagcctggagatgtcccagtgggagcagcacctggaccaaggcagc
gggcaggctttcttctataactcagtgacaggggagacgtcgtgggacctcccccagggg
ggggacacagccagtccccgggacgtgctccccggggtgacgcggtacggggccatggag
cacaggcgtcagcccagcagcctgagcaccccggagcacacggtggagctggctggggcc
accctggcctgggccaccagggacaagtccagcaagaagcacgtcctggaggatgaacca
gcagctctcggggtgggaaaacctcatgggtgtgatgagttggggcccgttctcagcccg
gccctgagctgcgcccgcgggcactgggggcccgggcagggaggtgacagtgacctgagc
agggtgaggaacaagctgcgcaggttcctgcagcggaggccgacggcgcaggcgctgagg
gacaggggctacatccgggacccggtgttcggctgctcgctggccgcgctgtgcgagcgg
gagcgggggacggtgccccgctttgtcctgcagtgcatccagagcgtggagaggagaggc
ctggacatcgacgggctctaccgggtcagcggcaacttggccaccatccagaaactgcgc
tacaaagaggggacagggcctctgaggtgctgccaccccacagatgagcacctggacctg
gacgacgggcgctgggaggacgtgcacctggtgacgggcgccctgaagctcttcttcagg
gaactgccggagccactggtgcccttcagccacttcgaccagttcatcatggccatcaag
ctgcaggccccggcccggcggtcccgctgcctccgtgacctggtgtcctctctccctccc
gcccaccacgacaccatgcaggttctcttccgccacctctgcagggtggtgcagtgccgg
gagcagaaccgcatgtcggtgcagagcgtcgccatcgtcttcgggcccaccctgctgagg
ccaccccacgaggagggtaacatggccatgcacatggtcttccagaaccaggtggtggag
cacatcctcaaccactacagctacatcttccctgatggataa
DBGET
integrated database retrieval system
