Chaetura pelagica (chimney swift): 104390626
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Entry
104390626 CDS
T08631
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04620
Toll-like receptor signaling pathway
cpea04621
NOD-like receptor signaling pathway
cpea04622
RIG-I-like receptor signaling pathway
cpea05164
Influenza A
cpea05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104390626 (TRAF3)
04621 NOD-like receptor signaling pathway
104390626 (TRAF3)
04622 RIG-I-like receptor signaling pathway
104390626 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104390626 (TRAF3)
05168 Herpes simplex virus 1 infection
104390626 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
Sina_ZnF
MPS2
ATG16
zf-C3HC4_2
FliJ
Spc29
Tropomyosin
KxDL
Med28
zf-RING_6
Rod_CreS
DUF1664
HrpB7
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
104390626
NCBI-ProteinID:
XP_009998102
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MDTSKKTDPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLSSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELSCPHADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagacagacccccctttatctgtagaaatggtacaacaaagggcc
aatcctgatcgcagtccttcagcatcgatttatgttccagaacaaggtggctacaaagag
aagtttgtaaacgccgtggaagataagtacaaatgtgaaaaatgtcacctcatcttatgc
aatccgaaacagactgaatgtggacacagattctgtgagacctgcatgaatgccttgcta
agttcttctagtccaaaatgtacagcgtgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcagatatactgcagaaatgaaaac
aagggctgtaaagagcaactgtctttgggtcaattactgatgcatttgaaaactgattgt
cagtttgaagaactctcatgtcctcatgctgattgcaaagaaaaaatactgagaaaagat
ttgccagaccatgtagagaagacctgtaaataccgggagacaacctgtaaatactgtaaa
agtcaagtcccaatgattatgttgcagaaacatgaagatacagactgcccgtgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggttgccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagccaagcagagaaactgaaagaactggacaaagaaatccgccccttccga
cagaactgggaggaggctgacagcatgaagagcagtgtcgaatccctccagaacagagtg
actgagctggaaagtgttgataaaacagcagggcaaggagctcgaaatacaagcctgcta
gagacacagctgagcagacatgaccagatgctgagtgttcatgatatccggctggctgac
atggacctccgattccaagttctagaaactgccagttacaacggagtattaatttggaaa
atccgagattataaacgtcggaagcaagaagcagtcatggggaagactctgtccttgtac
agccaacccttttatactggatactttggctacaagatgtgtgccagagtttaccttaat
ggagatggcatgggaaaggggacgcacttgtcgctgttttttgtcatcatgcgcggagaa
tacgacgcgttgcttccttggcccttcaaacagaaagtgactctcatgcttatggatcag
ggaccctctcgacgccacttaggagatgctttcaagccagatcccaacagcagcagtttc
aagaagccaactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatttaccagacccctga
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integrated database retrieval system
