Chaetura pelagica (chimney swift): 104394044
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Entry
104394044 CDS
T08631
Symbol
SMCR8
Name
(RefSeq) smith-Magenis syndrome chromosomal region candidate gene 8 protein
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104394044 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104394044 (SMCR8)
Membrane trafficking [BR:
cpea04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
104394044 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
104394044
NCBI-ProteinID:
XP_010001886
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
PFASPGANPWAKVAGSKFTRDFILISEFSEQVGPQPLLTIPDDAKVSGTFDLNYFSLRIM
SVDYQASFVGHPPGSAYPKLNFVEDSKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCM
AYISADEHKIMQQFQELSAEFSKASECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEI
QKKANDKGYYTTQAIEKANELASVEKSIIEHQDLLKQIRSYPYRKLKESDFHPYEPESLL
DQSDTSCDQGPTTSDVPEPGETPLFAHLPSYTPKLIKAKSAKCFDKKLKTLEELCDIYFF
TQTLDQLHQIERTFRGDVCYLLTDQISKALLKQQSVTNFLFEDVSFLDEKTPEKQSRGCQ
GLSQDAVDRKCLEESPAPKVVISLGSYKSSVESVPIKMEQDIEDSQEPQTTGSVTFEQQD
NLDYLDADIKGSISSGESIEVLGTEKPTSGLTKSESQASLPVSPSPQGGRSKVGSRRTVS
EDSIEVLSSCPSEALIPEDFKASYPSAINEEPYVDGEEGGLRFTPKLNLDDTDEQEDVLN
QENLEQVDSACCIGKESPGFLEPLSALGQKPCEEDGVVRIPPQPYRAEPGLHGGFPSHDG
ISGGLLPYELDSRYLAGNREVSKSSLDECSDSTSYISSAASTCSDRTPSPAHLSRQASER
HKKKAGQNALRFIRQYPFAHPAIFSLLSGRTLVVLGEEEAIVKKLVTALSIFVPNCGMDV
KPVKHWVASPLHLVDFQKWKLIGLQRVVSPAGVNVLHALSRYSRYLSILDADSKTLRCPL
YKGTLVSRLADHRTQIKRGSTYYMHVQSILTQLCSKAFLFAFCHHLHLPISEREPEESVV
NRRMNFLKLQLGLANEDVKIVQYLAELLKLQYIQEPDQGVNPLLRFDYVPSFLYKI
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
cccttcgccagccccggcgctaacccctgggccaaggtcgccggctccaagttcacccgg
gacttcatcctcatctccgagttctcggagcaggtggggcctcagcccctcctgaccatc
cccgatgatgccaaagtgtcgggcactttcgatctcaattatttttcccttcggatcatg
tctgtggattaccaggcctccttcgtggggcaccctcccggctctgcctaccccaagctg
aactttgtggaggattccaaagtggtgctgggggactccaaggaaggggcctttgcctac
gtccaccacttgactctctacgacctcgaagcccggggcttcgtgaggcccttctgcatg
gcctacatctctgctgatgagcacaaaatcatgcagcagttccaggaactctctgctgag
ttttccaaagcctccgaatgcctaaagacaggaaacaggaaagcttttgctaatgaactg
gaaaagaaactgaaagatctggactacaccaggaccgtcctgcacaatgaaaccgagata
cagaagaaagccaatgacaaagggtattacacaacccaagccattgagaaggccaatgag
ctggccagcgtggagaagtcaatcattgagcaccaagatctgctgaaacaaatccggtcg
tatccctacaggaagttaaaggagtctgacttccacccctatgagccagagtctctgctg
gatcagtctgacaccagctgtgaccagggccccactacctccgacgtccccgagcctggt
gaaacgcccctgtttgcccacctgccatcctacacccccaagctcatcaaagccaaatct
gccaaatgctttgacaagaagctgaagacactggaggagctctgtgatatttattttttc
actcaaacccttgaccagttgcatcagatcgagaggactttcagaggtgatgtctgctac
ctcctgactgaccagatcagcaaggctctcttgaagcaacaaagtgtcactaacttcctc
tttgaggacgtgtcttttctggatgaaaagacacctgaaaaacagagcagaggctgccag
gggctcagtcaagatgctgttgatagaaaatgtttggaagagtcccctgctcctaaagtg
gtcatcagcctgggatcctacaagtccagcgtggagagcgttcccatcaagatggagcag
gacatagaggactcccaagaaccccaaacgaccgggtcggtcacttttgaacagcaggac
aacctggactatctcgacgcggatattaaaggcagcatcagcagcggtgagagcatcgag
gttctggggacggagaaacccacctcaggcctgacgaaatcggagagccaggccagcctc
cctgtcagccccagcccccaggggggccgcagcaaggtgggcagccgacggaccgtcagc
gaggacagcatcgaggttctcagcagctgtccctccgaggcactcatcccggaggatttc
aaagccagctacccaagtgccattaacgaggaaccttacgtggatggtgaagagggaggc
cttcgtttcacccccaaactaaacctggatgacaccgacgagcaggaagatgttttgaac
caggagaacttggagcaggttgattctgcctgttgtatcgggaaggagagtcccggtttc
ctggagcccctgtctgcactgggccagaagccctgcgaggaggatggggtggtgaggatc
cccccgcagccgtaccgggctgagccggggctgcacgggggtttcccctcccatgatggc
atctcgggggggctccttccttacgagctcgactcgcgctacctggcgggcaacagggag
gtcagcaagagcagcctggacgagtgctctgattccaccagctacatcagcagtgctgcc
tccacctgctctgaccggaccccttctcctgcccacctctcccgccaggcgagcgagagg
cacaagaagaaggcggggcagaacgcgctgcggttcatccggcagtaccccttcgcccac
cctgccatcttctccctgctcagtggcaggaccctggtggtgctgggggaagaggaagcc
atagtcaagaagctggtgacggcgctctccatcttcgtgcccaactgtggcatggacgtc
aagcccgtcaagcactgggttgcttcccctctgcacctcgtggatttccagaagtggaag
ttgatcggactccagagggtggtgtcccctgctggggtgaacgtgctgcacgccctgagc
cggtacagccggtacctcagcatcctggacgctgacagcaagaccctgcgctgcccgctc
tacaagggcaccctggtgtcccggctggccgaccaccgcacccagatcaaacggggaagc
acctactatatgcacgtccaaagtatcctcacccagctgtgttcaaaagccttcctcttc
gccttctgccatcatttgcaccttcccatcagcgaaagggaaccggaggaatctgttgtg
aatcgcaggatgaactttctgaagcttcagctgggccttgccaacgaagatgtcaagatt
gttcagtatttagctgagctgctgaagctgcagtacattcaggaacccgaccagggggtg
aaccctctgctcagatttgactatgttcccagctttttgtacaaaatctag
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integrated database retrieval system
