Chaetura pelagica (chimney swift): 104396018
Help
Entry
104396018 CDS
T08631
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104396018 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104396018 (TDG)
Enzymes [BR:
cpea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
104396018 (TDG)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104396018 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
104396018
NCBI-ProteinID:
XP_010004099
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MMTAAPNMEMMSEQPTLEGVPEQNIAQEPPKEVKKGGRKRKAKATEPKQPKKPAAKKEKT
AKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFDLDIVIIGINPGLMAAYK
GHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLPHKYGIGFTNMVERTTPGSKDLSSKEF
REGGRILMQKLQKYKPRIAVFNGKCIYEIFSKEVFGIKVKNLEFGLQPHKVPDTETLCYV
MPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIAPNTEVQEVQYTFDLKLAQEDAKKMA
VKEEKYDPGYEAAYGGAYCDRAPYESDQCNFSSNGTAASNLQYCEGSSFGDIPNGHWMTQ
SFADQIPEFRAGVPREEEGSSA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgcagcgcctaacatggaaatgatgtcggagcagccaactctagagggcgtt
ccagagcaaaacattgctcaggagcctccaaaagaagttaaaaaaggaggaaggaaaaga
aaagccaaagcaactgagccaaagcaacccaaaaagcctgctgctaagaaagaaaaaaca
gccaagtcaaaaggcaaacaagaaaagatcacagatacttttaaagtcaaaagaaaagtg
gaccgttttaatggtgtatctgaagctgaacttctgaccaaaactttacctgatattttg
acctttgatctggacattgtaataattggcataaaccctggcttgatggcagcttacaaa
ggacatcattaccctggacctggaaaccatttttggaagtgtctgttcatgtctggtcta
agtaatgaacagctgaaccatatggatgaccacaccttgccacataaatatggaattgga
tttacaaacatggttgaaaggacaacacctggaagcaaagacctctccagcaaggagttt
cgggaaggagggcgaatcctgatgcagaagttgcagaagtataaacctcgtatagcagtt
ttcaatggaaaatgtatttatgaaatttttagtaaagaagtttttggaataaaagttaag
aatttggaatttggattacagccacacaaggtgccagacacagaaactctctgctatgtt
atgccgtcatccagcgcaagatgtgctcagtttcctcgtgcacaagataaagttcattat
tacataaagctgaaagacttaagggatcaactgaaaggcattgcaccaaacacagaggtg
caggaggtgcagtacacgtttgacttgaaacttgcacaagaggatgctaagaagatggct
gtcaaagaagaaaaatacgacccgggttacgaagcagcgtatggaggagcttactgtgat
cgtgcgccgtacgaaagcgatcagtgcaatttctcttccaatggaactgcagcaagcaat
ctgcagtactgtgaggggtcctctttcggtgacattcctaacggacactggatgacacag
tcctttgcagaccagattccagagttcagggctggggtgccacgggaagaagagggaagc
agtgcctga
DBGET
integrated database retrieval system
